Gene Mhun_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2560 
Symbol 
ID3922817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2841030 
End bp2842283 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content53% 
IMG OID637898172 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_503978 
Protein GI88603800 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA AGAGCAGGGA ATATTATACC ATTGCCAGGG ATCTGATGCC TGGTGGTGTT 
TCAAGTCCGG TCCGGGCAAT ACAGCCATAC CCCTTTTACA CGGTACGGGG ATCCGGCTCC
CGCATATATA CTGTAGACGG GACTGAACTG ATCGACTGTT GTGGGGCATA CGGACCGCTC
ATTCTGGGTC ATGCCTGTAA ACCGGTTGGC GATGCAATCT CTTCTGCACT GGATGATGGC
TGGCTGTATG GCACCCCGAC TCCGGCAGAG ATAGATCTGG CACAGATACT GATAGCTGAT
CATCCATCCA TAGAGATGGT CAGGTTTGTT ACTACCGGTT CGGAAGCGAC CATGGCAGCT
ATCAGGCTTG CACGGGGGTA TACCGGAAAG AGTGACATCA TCAAGACCGA GGGCGGATTT
CACGGGGCTC ATGACGGGGT CCTTGTGCAG GCAGGGTCCG GGTGTACCAC CCTTGGTCAG
CCTGATTCTG CAGGGGTTTT GTCAGATATC GTGCGGCACA CGAGGCAGGT TCCGTACAAT
GACACCGAGT CACTGATCTC TCTGGTGGAT AAAAGTGGTG ACGAGATCGC AGCCATGATT
CTGGAACCCG TGATGGGAAA TATCGGCCCG GTCCTCCCAA AGCCAGGGTA CCTTCAGGAG
GTCCGCAAGA TCACCGCTGA ACATGATATC CTGCTCATCT TTGACGAGGT CATCACCGGA
TACCGGGTTG GGATTGGCGG AGCACAAAAG CTCTTCGGGG TAACGCCGGA TATCACCACC
CTGGGTAAGA TCATAGGCGG AGGACTCCCT CTATCAGCAT TTGGCGGGAA AAGAAAGATC
ATGGAACTTA TCGCGCCCGC CGGGCCGGTG TACCAGGCAG GAACCTTCTC CGGAAACCCG
CTCAGTCTTG CAGCAGGTGT TGCAGCACTT CGGGAGATTC ATGCACGAAA GGGGATGTAT
ACGCTCCTCG ATACGGCGAC GACGGTGATC GGGGAAGCCT GTCAGGGGAA AGGAGGCTCG
TTTGTGAAAC TTGGGTCCAT GTTCAAGTTT TTCTTCCGTT CATCGGTTCC TGAAAATTAT
GCTCAGGCAA AAGAATCAGA CACGACAAAA TTCCGGGCAT TCTGGGAGAA GATGCTGGAA
AAGGGGATCT TTTTACCCCC GTCACAATTT GAGACTAATT TCCTGTCAGC TGCTCATTCT
GATTCGGATG TTGAATACCT CTCTTCGGCG TATGCATCAT GCCTCTCCGC GTAG
 
Protein sequence
MSEKSREYYT IARDLMPGGV SSPVRAIQPY PFYTVRGSGS RIYTVDGTEL IDCCGAYGPL 
ILGHACKPVG DAISSALDDG WLYGTPTPAE IDLAQILIAD HPSIEMVRFV TTGSEATMAA
IRLARGYTGK SDIIKTEGGF HGAHDGVLVQ AGSGCTTLGQ PDSAGVLSDI VRHTRQVPYN
DTESLISLVD KSGDEIAAMI LEPVMGNIGP VLPKPGYLQE VRKITAEHDI LLIFDEVITG
YRVGIGGAQK LFGVTPDITT LGKIIGGGLP LSAFGGKRKI MELIAPAGPV YQAGTFSGNP
LSLAAGVAAL REIHARKGMY TLLDTATTVI GEACQGKGGS FVKLGSMFKF FFRSSVPENY
AQAKESDTTK FRAFWEKMLE KGIFLPPSQF ETNFLSAAHS DSDVEYLSSA YASCLSA