Gene Mhun_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2280 
Symbol 
ID3925115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2544221 
End bp2544862 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content50% 
IMG OID637897889 
ProductRNase P/RNase MRP subunit p30-like 
Protein accessionYP_503704 
Protein GI88603526 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1603] RNase P/RNase MRP subunit p30 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGTCT TTGACGGTTG CGTTTTTCCT TATCCTTCCG GAACGGTAAG TATTGCCAGG 
TATGCACGGG AGCTTTCTTC ACTTGGGTTT TCTGGGTGCG TTGCTGCGAG CATGGCACCG
GTAAACAGGA TATATGACAT CCCGGTCTGG ACAGCACGAT ATCTGACGGA GGTTCCGGCC
CGTCTTCTCA GCAGAGAAGC AGGAAGATCC GTACAGGTGA ATGATCTCGT GTATGTACAG
GCGGGAGATG CCGGATATAA CCGGAATATC CTCACTACGC AGGGCGTCCA TGTCATGACC
AATCTGCATA CAACTCCGAA GGACGGGTTT GACCGGTACT GTGCACAACT TGCCGCCGAA
CGGGAGATTG GGGTGGATCT ATCAGTCAGA CCCCTCATTG AACTTCGTGA TGGTGCGAGG
CAAAAAGTCA TCAGAAGATA TGAAGAGATT TTTACGCTTC AGAACCGGTA TGAATTCCCG
ATTGTGCTGT CAAGTCATGC CTCTGATATA ACCCATCTAA AAAGTCCCCG GGAAATGATA
CGACTCTTTT CACTTGTATG GAAGGATGAG AACCTATTAT GGGAGTCTCT GGAGAGCATC
TGCCGGATAA AAAACCGGAC CGGACCGGTT GTGGAGATAT AA
 
Protein sequence
MHVFDGCVFP YPSGTVSIAR YARELSSLGF SGCVAASMAP VNRIYDIPVW TARYLTEVPA 
RLLSREAGRS VQVNDLVYVQ AGDAGYNRNI LTTQGVHVMT NLHTTPKDGF DRYCAQLAAE
REIGVDLSVR PLIELRDGAR QKVIRRYEEI FTLQNRYEFP IVLSSHASDI THLKSPREMI
RLFSLVWKDE NLLWESLESI CRIKNRTGPV VEI