Gene Mhun_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2176 
Symbol 
ID3922979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2446648 
End bp2447919 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content47% 
IMG OID637897780 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_503600 
Protein GI88603422 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGT ATAGTACCTT ATCCAGAATG GTCGAGCCAT TCCAGACACT CTATCCTGAT 
CGGGTTTCGC TCTTTGTCTG TGGTCCGACG GTATACAATT ATCCGCATCT TGGTCATGCA
CGGACCTATG TGGTCTTTGA TGTACTGGCA AAGTATCTCC GTTGGACCGG GCAGGAGGTA
CTGTATATCC AGAATATAAC CGATGTCGAT GATAAAATCA TCAACCGGGC ACAAGAAGAG
AAAATTTCAC AAAAAGATCT TGCAAGGAAG TTTGAGCGTG AATACATAAA AGATATGCTC
TCACTTGGCA TTGATTCGGT GAGTTATCAC GCCCGGGCAA CAACCCACAT CCCGGAAATC
ATCAACCAGA TAGAGCGACT GGTGGGGATT GGTGTTGGAT ATATCACAGA AACCGGTGTC
TACTTTAACA TTGATTCATT TCCCAGAAAC GGGGAATTAT CCGGGCAATC AAAGGATAAA
CGAATCAGCC GGGTTACTGA CACCAAAAAA CACAATCCTG CAGATTTTGT ATTATGGAAG
CGGGGAGAAT ATGGTGAATA TACCTGGGAC TCTCCGTGGG GAAGAGGCCG TCCGGGCTGG
CATATTGAGG ATACTGCCAT TACTGAGAAA TATTTCGGCC AGCAGTATGA TATCCATGGC
GGCGGGCTGG ATCTTATCTT CCCCCACCAT GAAGCCGAGA TAGCCCAGAT GGAATCACTT
GAGGGGAAAC ATCCGATGGT CAGGTACTGG ATGCATACCG GATTTTTGAC CGTTGAGGGG
GAAAAGATGT CAAAATCCCT GGGAAATTTC ATCAAAATTC AGGATGCTCT CAAAACATGG
GACAAAGATA TCATCAGGTA CTTTATTCTC CTCTCCCACT ACCGCTCACC GCTCCAGGTA
TCCGAAGAAG GTCTCCTCAA TGCAAAAAAA GCCCTGGAAC ACATCCGTGC TATCGCAATA
ACCGACAATG GTCCCTATCC TGAAGGACGG GATGCATTTA TCGCAGCTAT GGAATCTGAT
CTCAATACGC CGAATGCTAT TGCAGCAATC CATGCCCTTG CAGCACATGG TGATCTCGAA
GCGTTAATTG AATATGGAGA GATCCTTGGC ATTCGGTTCC TCCCCGAAAC CAGTGCTCCG
CTCAGTATCC TTCAGGATAT CAGGGCAGAA TTACGTGCCT CAAAACAGTT CGAAATCGCT
GATATGATTC GGAAAAAAAT TGCTGATGCA GGCATACAAG TTACGGATCC CCCCTTGAAA
CCCTTGAAAT AG
 
Protein sequence
MQLYSTLSRM VEPFQTLYPD RVSLFVCGPT VYNYPHLGHA RTYVVFDVLA KYLRWTGQEV 
LYIQNITDVD DKIINRAQEE KISQKDLARK FEREYIKDML SLGIDSVSYH ARATTHIPEI
INQIERLVGI GVGYITETGV YFNIDSFPRN GELSGQSKDK RISRVTDTKK HNPADFVLWK
RGEYGEYTWD SPWGRGRPGW HIEDTAITEK YFGQQYDIHG GGLDLIFPHH EAEIAQMESL
EGKHPMVRYW MHTGFLTVEG EKMSKSLGNF IKIQDALKTW DKDIIRYFIL LSHYRSPLQV
SEEGLLNAKK ALEHIRAIAI TDNGPYPEGR DAFIAAMESD LNTPNAIAAI HALAAHGDLE
ALIEYGEILG IRFLPETSAP LSILQDIRAE LRASKQFEIA DMIRKKIADA GIQVTDPPLK
PLK