Gene Mhun_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1979 
Symbol 
ID3924386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2233384 
End bp2234175 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID637897588 
ProductNifC-like ABC-type porter 
Protein accessionYP_503408 
Protein GI88603230 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR01581] NifC-like ABC-type porter
[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.200297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATTCTG GCTTCTGGTT TCAGGGTTTT CTAATTCTCC TCTCTGGATC TCTGATACTC 
CTATTCTGCC TGGTATTTAC GAGTCTCGTC CTCTGGCCTG ACACACATGC CCTTATCCGG
GTACTAACTT CCGAAGAGAT TTTGTTTTCG ATTCAACTGT CCCTGATCAC ATCACTCATC
TCTACCATAT TCTGCGCCGT TATTGCTCTC CCTGTTGCAT ATGCACTTTC CCGATACCAC
TTTCCAACAT CAGGATTCAT GGGTATGGTC ATCAGCCTTC CCCTCTCCCT CCCACCACTG
GTCGCTGGTA TTGCCCTTCT GATATTCTTC GGACCATCTT TTTTCGGTAA TATTCTCCGC
TTTATCGGGA TTGATATTGT GTATACCACC ACCGCAATTG TTATCGCTCA GTTTTTTGTA
AATGTTCCGT ATCTAATCAG AGTCATGCGG TCTGCTTTTG ATTCAGTACC TCCCCGGTAT
GAGCATGTGG CAAGAACACT TGGAGCATCT GAATCTGCCG TATTTTTGCA GGTCAGTCTT
CCCATGTCCC ACCAGGCTCT TCTTGCAGGA CTTACCATCA CCTGGTCTAA AGCCATGGGA
GAGTTTGGAG CTGTCCTAAT GCTCGCTGGT GCAACCAAGA TGAAAACTGA GACATTGCCA
ATAGCCCTGT ATCTGAATAT CTCAACCGGG GATCTTGACC TGGCCATTGC GTCAGCGACC
ATTTTAATGG CAATCTCGGT AGGAACATTA CTTGTCTTTG AACACTGGTT TGGAGTAAAA
AGGAAGGTAT AG
 
Protein sequence
MYSGFWFQGF LILLSGSLIL LFCLVFTSLV LWPDTHALIR VLTSEEILFS IQLSLITSLI 
STIFCAVIAL PVAYALSRYH FPTSGFMGMV ISLPLSLPPL VAGIALLIFF GPSFFGNILR
FIGIDIVYTT TAIVIAQFFV NVPYLIRVMR SAFDSVPPRY EHVARTLGAS ESAVFLQVSL
PMSHQALLAG LTITWSKAMG EFGAVLMLAG ATKMKTETLP IALYLNISTG DLDLAIASAT
ILMAISVGTL LVFEHWFGVK RKV