Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1979 |
Symbol | |
ID | 3924386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 2233384 |
End bp | 2234175 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637897588 |
Product | NifC-like ABC-type porter |
Protein accession | YP_503408 |
Protein GI | 88603230 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0555] ABC-type sulfate transport system, permease component |
TIGRFAM ID | [TIGR01581] NifC-like ABC-type porter [TIGR02141] molybdate ABC transporter, permease protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.200297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATTCTG GCTTCTGGTT TCAGGGTTTT CTAATTCTCC TCTCTGGATC TCTGATACTC CTATTCTGCC TGGTATTTAC GAGTCTCGTC CTCTGGCCTG ACACACATGC CCTTATCCGG GTACTAACTT CCGAAGAGAT TTTGTTTTCG ATTCAACTGT CCCTGATCAC ATCACTCATC TCTACCATAT TCTGCGCCGT TATTGCTCTC CCTGTTGCAT ATGCACTTTC CCGATACCAC TTTCCAACAT CAGGATTCAT GGGTATGGTC ATCAGCCTTC CCCTCTCCCT CCCACCACTG GTCGCTGGTA TTGCCCTTCT GATATTCTTC GGACCATCTT TTTTCGGTAA TATTCTCCGC TTTATCGGGA TTGATATTGT GTATACCACC ACCGCAATTG TTATCGCTCA GTTTTTTGTA AATGTTCCGT ATCTAATCAG AGTCATGCGG TCTGCTTTTG ATTCAGTACC TCCCCGGTAT GAGCATGTGG CAAGAACACT TGGAGCATCT GAATCTGCCG TATTTTTGCA GGTCAGTCTT CCCATGTCCC ACCAGGCTCT TCTTGCAGGA CTTACCATCA CCTGGTCTAA AGCCATGGGA GAGTTTGGAG CTGTCCTAAT GCTCGCTGGT GCAACCAAGA TGAAAACTGA GACATTGCCA ATAGCCCTGT ATCTGAATAT CTCAACCGGG GATCTTGACC TGGCCATTGC GTCAGCGACC ATTTTAATGG CAATCTCGGT AGGAACATTA CTTGTCTTTG AACACTGGTT TGGAGTAAAA AGGAAGGTAT AG
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Protein sequence | MYSGFWFQGF LILLSGSLIL LFCLVFTSLV LWPDTHALIR VLTSEEILFS IQLSLITSLI STIFCAVIAL PVAYALSRYH FPTSGFMGMV ISLPLSLPPL VAGIALLIFF GPSFFGNILR FIGIDIVYTT TAIVIAQFFV NVPYLIRVMR SAFDSVPPRY EHVARTLGAS ESAVFLQVSL PMSHQALLAG LTITWSKAMG EFGAVLMLAG ATKMKTETLP IALYLNISTG DLDLAIASAT ILMAISVGTL LVFEHWFGVK RKV
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