| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1878 |
|---|
| Symbol | |
|---|
| ID | 3922088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2124051 |
|---|
| End bp | 2124599 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637897494 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_503314 |
|---|
| Protein GI | 88603136 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.871344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGT CAAACCCATC CTGGCGGGCA ATTAAAACAA GTCTGGCCGG AATGGATGCT
AATTCCCTCA TATCTCTCAT TCATGATCTC TATGCCCTGA ATAAGGAGAA CAAAGAGTAT
TTGCAGGGAA GAGTTGGGGG AGAAGCAGCA TATGCCAGTC TTCGTGAGAA TGCAGCCAAA
AAGATCAGAC ATGAGTTCTT TCCTGAACGT GGATATGGAA AAGCCAGAAT TGCTCCGGTT
AAAAAGGCTA TTCAGGGTTA TAAGAAAGCG ACCGGAGACC CCATTGGAAC TGCTGATCTG
ACCCTCCAGT TTATCGAACA GTTTGTAAAA CTTTGCCGGG AATATGGGGG TGAGGAACAG
TCAAAATTAG ATGCACTCAG TGTTGCGATG AAAGAATTGC TTAAAATTCT TGAGTCATGT
CCTGCAATAA TTGAGGTCTT GAATATTGAA GAGCGACTTG CCGCTGCAAA GAAAGATGCA
TCCTATTTTG GATTCGGTAT TGAAGATAAA ATATTTGATC TTATCGTTGA TATCGAGGCT
CTTGAGTAG
|
|---|
| Protein sequence | MSQSNPSWRA IKTSLAGMDA NSLISLIHDL YALNKENKEY LQGRVGGEAA YASLRENAAK
KIRHEFFPER GYGKARIAPV KKAIQGYKKA TGDPIGTADL TLQFIEQFVK LCREYGGEEQ
SKLDALSVAM KELLKILESC PAIIEVLNIE ERLAAAKKDA SYFGFGIEDK IFDLIVDIEA
LE
|
|---|
| |