Gene Mhun_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1674 
Symbol 
ID3925180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1896656 
End bp1897549 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content49% 
IMG OID637897301 
Productzinc finger, SWIM-type 
Protein accessionYP_503121 
Protein GI88602943 
COG category[S] Function unknown 
COG ID[COG4279] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.14188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAGAC GCAAGAACCG ATGGTGGATC AAATCCATTC ATGATGTTCC TGAAGAAAGA 
AAGATCCGGC TGAAAGCTCA GGATGGCCCG GTTGGGACGT CATGGTATGC ACGGGATTTT
GTCAGGGCAA TGGAGGCTGT TGCAGAGAAG AAACGGCTTG CCCGGGGCCT TGACTGTGCC
AGGAATCATG AGGCTTCCAG ACTGGTATTC AGGCCGGGAT GGATTACGAT CGGGATCAGT
TGCTCCGGGT ATACGATTCG TGATGTTGAC TTTTCGGTTA CCGAGTTCGT AAAGCCTGAA
TGGGATAAAC TGATAAATAC AATTGCTGCA GATGCATCTC TGACCGGGGC ACTGGTATCC
GGGGATTTCT CCGAACATTT TGTTGATGAA CTCCGGCGTG TTGGTATTGA CCTGATCCCC
TCGAGTGGCC AGGGATTTTA CTGCTATTGC AACTGCGGTG ACCATCATGA TCCCTGTATT
CATCAGATCG CCGCACGATA TTTTATTGCA GAGGCACTGG ATGATGATCC CTGGAATCTT
CTGTACATCA GGGGAAAGAG CAGAGATGAT GTGTTGAATG CGGTACGGCA GGTCAAGTCG
GTTCAAACAG AGACGGTGAG CAATAGTGGC GGGACACCGG TATCCGGATT TTTTCCTTCA
GGGATCTCAC TCCCAGAAAA GGCCGCTCCT ACCGGGTTTT TCACCTGTGA AGGGGAGGGT
CCACTTGTCC CAATCCAGAG AGAGTCGGTA CGGGTCATTC CTATAAAGTT GCTTGGAAGA
TCTCCCTATT ATTTTGGGAG AGAAAACATG GCAGATGCAG TTACAGAACT GTATTCCTCT
ATCTTTTCAT ATGCAGACTC AATTCTTCCC GATGAAAAGG AGGAAGAGGA GTGA
 
Protein sequence
MRRRKNRWWI KSIHDVPEER KIRLKAQDGP VGTSWYARDF VRAMEAVAEK KRLARGLDCA 
RNHEASRLVF RPGWITIGIS CSGYTIRDVD FSVTEFVKPE WDKLINTIAA DASLTGALVS
GDFSEHFVDE LRRVGIDLIP SSGQGFYCYC NCGDHHDPCI HQIAARYFIA EALDDDPWNL
LYIRGKSRDD VLNAVRQVKS VQTETVSNSG GTPVSGFFPS GISLPEKAAP TGFFTCEGEG
PLVPIQRESV RVIPIKLLGR SPYYFGRENM ADAVTELYSS IFSYADSILP DEKEEEE