Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1674 |
Symbol | |
ID | 3925180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 1896656 |
End bp | 1897549 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637897301 |
Product | zinc finger, SWIM-type |
Protein accession | YP_503121 |
Protein GI | 88602943 |
COG category | [S] Function unknown |
COG ID | [COG4279] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.14188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAGAC GCAAGAACCG ATGGTGGATC AAATCCATTC ATGATGTTCC TGAAGAAAGA AAGATCCGGC TGAAAGCTCA GGATGGCCCG GTTGGGACGT CATGGTATGC ACGGGATTTT GTCAGGGCAA TGGAGGCTGT TGCAGAGAAG AAACGGCTTG CCCGGGGCCT TGACTGTGCC AGGAATCATG AGGCTTCCAG ACTGGTATTC AGGCCGGGAT GGATTACGAT CGGGATCAGT TGCTCCGGGT ATACGATTCG TGATGTTGAC TTTTCGGTTA CCGAGTTCGT AAAGCCTGAA TGGGATAAAC TGATAAATAC AATTGCTGCA GATGCATCTC TGACCGGGGC ACTGGTATCC GGGGATTTCT CCGAACATTT TGTTGATGAA CTCCGGCGTG TTGGTATTGA CCTGATCCCC TCGAGTGGCC AGGGATTTTA CTGCTATTGC AACTGCGGTG ACCATCATGA TCCCTGTATT CATCAGATCG CCGCACGATA TTTTATTGCA GAGGCACTGG ATGATGATCC CTGGAATCTT CTGTACATCA GGGGAAAGAG CAGAGATGAT GTGTTGAATG CGGTACGGCA GGTCAAGTCG GTTCAAACAG AGACGGTGAG CAATAGTGGC GGGACACCGG TATCCGGATT TTTTCCTTCA GGGATCTCAC TCCCAGAAAA GGCCGCTCCT ACCGGGTTTT TCACCTGTGA AGGGGAGGGT CCACTTGTCC CAATCCAGAG AGAGTCGGTA CGGGTCATTC CTATAAAGTT GCTTGGAAGA TCTCCCTATT ATTTTGGGAG AGAAAACATG GCAGATGCAG TTACAGAACT GTATTCCTCT ATCTTTTCAT ATGCAGACTC AATTCTTCCC GATGAAAAGG AGGAAGAGGA GTGA
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Protein sequence | MRRRKNRWWI KSIHDVPEER KIRLKAQDGP VGTSWYARDF VRAMEAVAEK KRLARGLDCA RNHEASRLVF RPGWITIGIS CSGYTIRDVD FSVTEFVKPE WDKLINTIAA DASLTGALVS GDFSEHFVDE LRRVGIDLIP SSGQGFYCYC NCGDHHDPCI HQIAARYFIA EALDDDPWNL LYIRGKSRDD VLNAVRQVKS VQTETVSNSG GTPVSGFFPS GISLPEKAAP TGFFTCEGEG PLVPIQRESV RVIPIKLLGR SPYYFGRENM ADAVTELYSS IFSYADSILP DEKEEEE
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