| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1215 |
|---|
| Symbol | |
|---|
| ID | 3924247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1382672 |
|---|
| End bp | 1383964 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637896858 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_502681 |
|---|
| Protein GI | 88602503 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.285104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0156035 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGC TTCTAATTCT GCTCGGCTGT ATTGCCGGCT ATGTCCTCCT TCTTGCATAT
ATCCGGACAT ATAATCCCTA TCCCCGTTTC ATCACACTGT ATGGTCCGAT TATCGGGCTG
AAGACAGATC AAGTAGGATT TTTCGACTAC TTCAGAAAGT TCTCCGGTTT TTTACGTATA
TATGGAACGA TTGGAGTAGC TATGGTGATC ATCGTGTCCG TTGCGATGGT TGTGATGCTC
CTCCTCTCAG TAAACCTGAC CCTCGAATTA AAACCTGAAC CGACATCCCT TCATAAGCCT
CAGAATATCT TTCTCATTCC TGGTGTCAAT GAGTTTGTCC CATCAACCTT TGCGGTCTGG
TTTGCGTTTA TCCTGACTTT AGTGGTTCAT GAGTTTGGTC ATGCAATTCT CTGCAGGGTT
GAACAGATTG CAGTAAAGAG TATGGGCGTG TTGTTCCTGA TAATTCCCAT CGGTGCCTTT
GTTGAGCCTG ATGATGAGGA GGTAAAGAAA GCATCTCCCT GGCCACGGAT GCGGATGTAT
GGGGCGGGAA TCATCAACAA CATCCTTATT GGCCTTATCA GTTTTGGTCT CATGGTCAGC
ATGATCGGGA TGGCAGTGCC AATCCAAGAG CCGGTGGTTG TGGGTCTTTA TCAGAATTAC
TCTGCAGCAC AGGCAGATGT CCCGACACCC TCCATTATCA GGACAGTCAA TGGCGAATCA
GTATCAACCA CACAGGATGT ATCTGACATT CTGAATACAA CCCGTCCGGG AGATACGGTC
ATCGTGGGAT TTGATCATAA TGGAGAACGA AAATACTATT CGCTCAATGT ATCACCCTGG
CCTGAAGCAC TCGGCAGTCG TGAATCCGGT TTCATGGGGG TCTTTTACTA CAACGGTCAG
GGGATCATCG ATACCGTGCA GAGCATGTTC TCCCCGGTCG GAATTTTCAT GCTTCTTTCC
GTTCCGTTTA ACCCGACCAT GGAAGGGCAG TATATGAAGA TACTGGGATT TGATGTTACC
GATACCGGGT ATTATCAGGT GCCGTTTCCA GGGTATTGGG AGCTCATACA CCTTCTATTC
TGGAGTGGAT TTATTAACCT GGCAGCCGGT CTTTTCAACG CTCTCCCCAT GATCCCTCTT
GATGGTGGTT TTATCTTTAA AGAAGGGACG GAACGGATCC TGACCCGCAG GGGACTTGCA
CGATATACGG ATCATATCGT CGGCTTTGTC AGTACCGGTA TGGTCGTTCT GATGGTGGCG
ATATTCACCC TGCCATACCT CTTCCATCTG TAA
|
|---|
| Protein sequence | MDWLLILLGC IAGYVLLLAY IRTYNPYPRF ITLYGPIIGL KTDQVGFFDY FRKFSGFLRI
YGTIGVAMVI IVSVAMVVML LLSVNLTLEL KPEPTSLHKP QNIFLIPGVN EFVPSTFAVW
FAFILTLVVH EFGHAILCRV EQIAVKSMGV LFLIIPIGAF VEPDDEEVKK ASPWPRMRMY
GAGIINNILI GLISFGLMVS MIGMAVPIQE PVVVGLYQNY SAAQADVPTP SIIRTVNGES
VSTTQDVSDI LNTTRPGDTV IVGFDHNGER KYYSLNVSPW PEALGSRESG FMGVFYYNGQ
GIIDTVQSMF SPVGIFMLLS VPFNPTMEGQ YMKILGFDVT DTGYYQVPFP GYWELIHLLF
WSGFINLAAG LFNALPMIPL DGGFIFKEGT ERILTRRGLA RYTDHIVGFV STGMVVLMVA
IFTLPYLFHL
|
|---|
| |