| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1149 |
|---|
| Symbol | |
|---|
| ID | 3922791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1293690 |
|---|
| End bp | 1294901 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637896787 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_502616 |
|---|
| Protein GI | 88602438 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.215921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACA CAATAATTAA AAATATAGCC GAAATTGAAC ATCAGCCTTA TGAATTAATC
CGGAAAGGAA TAGAAACCGG ATCCATTGCA ATCATGTACC GTGGTAATAT GGGAATTGCA
ATCGGAACAG GACTCAGGAC AAAAATAAAT GTAAACCTTG GTACCTCATC TGGTCATTGT
GTCCCAGAAG AAGAGATTCA AAAAGCGAAA ATTGCTGAAC TTTATGGTGC AGACACTATT
ACGGACTTGT CAACCGCTGG AGACATACCA GAAATCAGAC AATCAATACG TGATGTCACA
TCACTCCCCA TGACCACAGT CCCTCTCTAC CAGGCGGTTG CAGAAAATAC CCTTGATTAT
CTCACTGATG ATCTCATAAT AGAGAACCTG AAAGAACAAA TCAAAGAAGA TATTTCATCA
ATGGTCCTTC ATTGTCCCTC TAGACAGACC ATAAAGGCAA TGAAACAGAG TTCCCGCATA
ATGGGAGTTG TTTCCAAAGG AGGCGCAATG ATGAGTTCAT TTATGCTAAA AAATAATCAG
GAAAATCCCT ATATTACACA TTTTGATGAG ATTCTCACTA TACTAAAATC GAAAGATGTC
GTCCTTTCAC TCGGAAATAC CATGAGAACA GGTTGTATCC ATGATAACCG GGATAGTGCA
CAGGTTCTGG AGATAAACGA GAATATCCTG CTGGCACAGC AGGCTCATGA GAAAGGAGTT
CAGGTAATTA TTGAAGGAGC CGGAGGACAT ATCAGAGCCG ATAAAATCGC AGAAAATATA
AGGTACTACA AAGATAAGAC AGATTTTCCA CTCTTTGTAG CAGGACCACT TCCAGCGGAT
GTTGGCATGG GATATGATCA TATTACCGGT GCGATTGGCG CAACATTCGC AGCAGGAGCC
GGAGCAGATT ATCTCTGTTA CATCACTAGG GCAGAACATA AAAGTCTTCC GACTCCTGAT
GAGGTCAAAG AAGGACTTAT TGCATTCCGG ATTGCTGCTC ATATTGGAGA TTCAATGAAA
TATGGATTGT CTGAAAAGGA CAAACATATC GCTGAGAAAA GAGCGCAAAT GAATTTTGAG
GAACAGGCAG CATTTGCTCT GGACCCGGAG GAAGCAGGAC GGGGTATTCC TATGGATACA
AATTGTTCCA TGTGTGGATC TTTCTGTGCA CTAAAAATGA TTCAGACCTA TTGTAGAAGA
ACTGATGAAT AG
|
|---|
| Protein sequence | MNNTIIKNIA EIEHQPYELI RKGIETGSIA IMYRGNMGIA IGTGLRTKIN VNLGTSSGHC
VPEEEIQKAK IAELYGADTI TDLSTAGDIP EIRQSIRDVT SLPMTTVPLY QAVAENTLDY
LTDDLIIENL KEQIKEDISS MVLHCPSRQT IKAMKQSSRI MGVVSKGGAM MSSFMLKNNQ
ENPYITHFDE ILTILKSKDV VLSLGNTMRT GCIHDNRDSA QVLEINENIL LAQQAHEKGV
QVIIEGAGGH IRADKIAENI RYYKDKTDFP LFVAGPLPAD VGMGYDHITG AIGATFAAGA
GADYLCYITR AEHKSLPTPD EVKEGLIAFR IAAHIGDSMK YGLSEKDKHI AEKRAQMNFE
EQAAFALDPE EAGRGIPMDT NCSMCGSFCA LKMIQTYCRR TDE
|
|---|
| |