Gene Mhun_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1020 
Symbol 
ID3924788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1149783 
End bp1150682 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content45% 
IMG OID637896658 
Product8-oxoguanine DNA glycosylase-like 
Protein accessionYP_502489 
Protein GI88602311 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID[TIGR00588] 8-oxoguanine DNA-glycosylase (ogg) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.321644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCCT TTTCACTCAC AGAGTCACAA CTTCCTTTCG ATCTCGATCT CTCACTCTCA 
TGCGGGCAGA TATTTGGATG GAAGAAAACA AGGGATACAT GGAAAGGGGT ACATAATGGG
AGTATTGTAA CAATCAGACA GAAGGGCATT CTCATCGAAT ATGATGGATT ATCACAGCAG
GATGTCATCC GGTTTTTAGG GTTATCTGAT CCCATCTCTG ATATTATCGA ATCCATAAGA
GAACATATCA TCGCATACAA AGGTTCACCA GATCGATTTT TTGAAACCAG GTACAGCCAG
TCACGGGGAC TCCGGATACT CAGGCAACAT CCCTGGGAAT GCCTGGTGAG TTTCATCTGT
TCGGCAAACT CGAATGTCAG CACTATCGGG AAACGAATCA ACCTCATTCT TGGGCGATAT
GGCACCTCAT GCACACTATT CGAGAACACG TTCCCGGATC CAGCAGTACT CTCTCAATGC
CAGGAACCAG AACTTCGGGA ATGCCTGACA GGATACCGGG CTCCCTACCT GATAAAAACC
GCTCAGTATA TTCATGAGCA TCCTGACTTC TTTCATCAGG TCAGAAAAAT GGAATACCAT
CAGGCAAAAG ACACGTTGAT GAATTTACCC GGAGTCGGAC CAAAAGTTGC AGACTGCGTT
TTACTCTTTG CATTTGAACA TCTCAATGCA GTCCCGGTGG ACATCCGGAT ACGGAAGATA
ATTGAAGATA AATACGCCAG TCTTATCCAC ACCGATAAGA GTGGAAAACT CCCCTATGAT
ACTATTGGCG GATTCTGCAG GGAGTACTTT GGTCCTTATG CCGGATATGC CCAACAATAT
CTCTTTGCTA CCCGCGATTT GGAAAAAGGA GAGGTTACCA GATCTGCTGA ATTACCATGA
 
Protein sequence
MKSFSLTESQ LPFDLDLSLS CGQIFGWKKT RDTWKGVHNG SIVTIRQKGI LIEYDGLSQQ 
DVIRFLGLSD PISDIIESIR EHIIAYKGSP DRFFETRYSQ SRGLRILRQH PWECLVSFIC
SANSNVSTIG KRINLILGRY GTSCTLFENT FPDPAVLSQC QEPELRECLT GYRAPYLIKT
AQYIHEHPDF FHQVRKMEYH QAKDTLMNLP GVGPKVADCV LLFAFEHLNA VPVDIRIRKI
IEDKYASLIH TDKSGKLPYD TIGGFCREYF GPYAGYAQQY LFATRDLEKG EVTRSAELP