Gene Mhun_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0892 
SymbolruvB 
ID3923614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp997474 
End bp998487 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content50% 
IMG OID637896528 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_502361 
Protein GI88602183 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0867495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA GATTTGTAAG CCCGGTAAAC CATGATGAAG AGCAGGATGA ACCCTCCGTC 
AGACCAGGGC TTCTGGCAGA TTTTATTGGT CAGGATTCGA TAAAGGATGC GCTAACGGTG
GCGATTACAT CCGCCAGGAA ACGAAATAAG CCGCTTGATC ATATCCTCTT CTCTGGACCG
CCGGGTCTTG GAAAAACCAC GCTTGCACAC ATCATCGCCC AGGAGATGAA TTCACACATC
GAGACGACAA GCGGTCCGGT GCTCGACAGG CCTGGAGATC TGGCAGCTCT CCTTACCCCT
CTGAAGGATA GGGATTTTTT ATTTATTGAT GAAATTCATC GGTTGTCTCC GGTCATTGAA
GAGATACTCT ATCCGGCCAT GGAGGATTAT ACAATTGACC TTCTGATCGG TGAAGGGCCT
TCAGCACGGA CCATACAGCT TCCCCTGGAG CGGTTTACTC TCATCGGTGC AACCACCCGT
CTTGGTCTTC TCGGTTCTCC TTTCAGGGAT CGGTTCGGTA TCATCCTGCG GCTTGATCTG
TATGATCCAT CCGAACTTAC GGTAATCGTC ACTCGATCAG CCGGAATTCT GGGCATTCCC
ATCACTCCTG AAGGGGCTGC AGAGATTGCA GGACGGTCCA GAGGAACACC CCGGATTGCG
AACCGACTGC TAAAAAGAGC ATATGATTAT GCAATCGTCA GGGGCACGGG ATCAATAGAC
CAAAATATCG CCAATACTGC ACTTTTTGCG CTTGGCGTGG ATCAGAAAGG GCTTGATATC
CTGGACAGAA GAATCCTCGA AGTGATTGCC AATGACTTTG ACGGCGGCCC GGTCGGTCTG
AAAACCATCT CAATATCAGT CGGTGAGGAG CCGAGGACCA TTGAGGATGT ATATGAACCA
TACCTTATCA GAATCGGATT TCTAAAAAGA ACCCCCCAGG GCCGGATGAT AACCAGTGCA
GCACGGGATC ATCTGGGAAA TTCCCATACC AGAGATCTCA CCTCCTTTCT CTGA
 
Protein sequence
MQTRFVSPVN HDEEQDEPSV RPGLLADFIG QDSIKDALTV AITSARKRNK PLDHILFSGP 
PGLGKTTLAH IIAQEMNSHI ETTSGPVLDR PGDLAALLTP LKDRDFLFID EIHRLSPVIE
EILYPAMEDY TIDLLIGEGP SARTIQLPLE RFTLIGATTR LGLLGSPFRD RFGIILRLDL
YDPSELTVIV TRSAGILGIP ITPEGAAEIA GRSRGTPRIA NRLLKRAYDY AIVRGTGSID
QNIANTALFA LGVDQKGLDI LDRRILEVIA NDFDGGPVGL KTISISVGEE PRTIEDVYEP
YLIRIGFLKR TPQGRMITSA ARDHLGNSHT RDLTSFL