Gene Mhun_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0562 
Symbol 
ID3923139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp650849 
End bp651391 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID637896201 
ProductSua5/YciO/YrdC/YwlC 
Protein accessionYP_502041 
Protein GI88601863 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.440322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGATG GTCTGGTTGT ATATCCGACA GATACCCTGT ATGGTCTTGG AGCTGATGCC 
TTATCGGATG AGGCAATTCT GAAAGTATTT GAAGCAAAGG GCCGTGAATA TCATAAACCC
ATCTCGATTG CGGTATCAGA TCCTGACATG ATTGGTGCGG TTGCCTATGT GGATGAGATG
GCAGAGCAGT TTATTGAAGA GTTCCTTCCC GGACCGGTCA CCCTCATCCT TCCTGCACGA
AATATTTTAT CAACACGGCT TACCGCCGGG ACGAAAAAGA TAGGAATCAG GTATCCGAAC
CATGAGGTGG CCCTTGAACT GATATCCCGG TATGACACTC CGATAACAGC AACCAGTGCC
AATCTGTCCG GTGGTCCTGA CCCTGTCACG ATTGATCTCT GTAATGTACC GTATGACTGT
GCGGTAAATG TCGGACCACT CTCTGGGACG CCCTCAACGG TCGTTGATCT GGAGTTTCGT
GAGATCATCC GGGTTGGAGC AGATATAGAG TCAGTCGCAT CATTTCTGGC AAAGTGGTCC
TGA
 
Protein sequence
MHDGLVVYPT DTLYGLGADA LSDEAILKVF EAKGREYHKP ISIAVSDPDM IGAVAYVDEM 
AEQFIEEFLP GPVTLILPAR NILSTRLTAG TKKIGIRYPN HEVALELISR YDTPITATSA
NLSGGPDPVT IDLCNVPYDC AVNVGPLSGT PSTVVDLEFR EIIRVGADIE SVASFLAKWS