| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0213 |
|---|
| Symbol | |
|---|
| ID | 3923869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 238619 |
|---|
| End bp | 239383 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637895861 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_501704 |
|---|
| Protein GI | 88601526 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000665889 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGG TTCTCCAGGT AACAAATCTC TCGAAAACCT TCGGCCATGG AGATATCTTC
CGTGATGTGT CATTCACTCT GAATGCCGGA GAAACTATCG GTCTGTTCGG TCCAAGCGGA
TGTGGAAAGT CAACTTTGGG ACGGTGTATA TTGGGCCTTG AAAAATTGAC AAAAGGCTCA
GTACTCTTTG AAGGGAAGGA CATTTTCAGA CTGGACCGAA AGGAGCGATC TTGTCTGCAG
GCAAAAATGC AGATGGTATT CCAGCACCCG GAGGTATCAT TTGATCCTCG CCGACGCTTG
ATCTATAGTG TGACTGAACC ACTAGTGTAT CATGAAAAGG GCGAATCCGA AGATGTATTA
CACTCCCTTC TCCCATTAAT CCATGCAGTC GGTCTTCATC CGGGTATCCT GGATAAATAT
CCCGGACAAC TCTCCGGTGG TGAACTCCAA CGAGCGATGA TGGTCAGAAT TTATTCACTC
TCTCCCCACC TTCTTATTGC AGATGAACCA ACATCCATGC TGGACATGTC AGTTCAGGCA
CAAATTTTGA ATCTCATGAA AGAGATGCAG AAGAAAAACT CTACGGCATG TATTTTCATC
TCCCATGATC CGGAGGTCAT GCAGGTGATG TGTGATCGGA TCGGTGTGAT GTCAGAGGGA
AAGTGTGAAA TAATGAATAA AAATTACTTT TCAGAATGGA TACAGCCGTT ATTGGTGATG
GACACAATGG AAAAGGATCA TTATGAGTGT CTTTTAACTT CTTAA
|
|---|
| Protein sequence | MSSVLQVTNL SKTFGHGDIF RDVSFTLNAG ETIGLFGPSG CGKSTLGRCI LGLEKLTKGS
VLFEGKDIFR LDRKERSCLQ AKMQMVFQHP EVSFDPRRRL IYSVTEPLVY HEKGESEDVL
HSLLPLIHAV GLHPGILDKY PGQLSGGELQ RAMMVRIYSL SPHLLIADEP TSMLDMSVQA
QILNLMKEMQ KKNSTACIFI SHDPEVMQVM CDRIGVMSEG KCEIMNKNYF SEWIQPLLVM
DTMEKDHYEC LLTS
|
|---|
| |