| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0204 |
|---|
| Symbol | |
|---|
| ID | 3923573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 229429 |
|---|
| End bp | 230352 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637895853 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_501696 |
|---|
| Protein GI | 88601518 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.637035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTG TATCCAGTAT CATAACCGGA ACTGGGCTTG GTAAAATCTA CCAATCCGGG
TTTTTCAGTC ACCAGAAGAC TTTCGCAGTG CAGGATGTAG ATATTGAGAT TAAAGCCGGA
GAGACCTATG CTCTTGTTGG AGAGAGCGGG AGTGGAAAAA CCACTCTGGG AAAAATTCTG
CTCAAACTAA TCTCACCTAC CACTGGCAGA ATTTTCTATC ATAACGAGGA TATTACTGAT
CTTCAAGGTC CAGAACTCAT TCCAATCCGA CGAAAGATGC AGATAATACC ACAGCACCCT
GAGGATGCAT TTAATCCACG GTGGAGATTA TCACGGTCAA TAATGGAGCC TTTTTTAATA
CATGGTCAGG CTCAGGAAAA GGGGGGATTA AAGAATGTTC TCTTAGAGCT TCTTGCCGAA
ACCGGTTTGA ACCCAGATTA TGCAGAGCGG TATCCACATC AACTCTCAGG CGGTGAACTT
CAGCGGGCAG CCATTGCACG TGCCCTTGCA TTAAAGCCGG ACTTTATCCT CTGTGATGAA
CCTACCTCGA TGCTTGATGT TTCTGTGCAG GCGGCAATAA TCCAGCTCCT CCTTTCACTT
CAGAAGAGAA GTACCATCTC TCTCCTTTTC ATCACCCATG ATTTAAAACT TGCAGACCAT
ATTGCAGACC GAGTCGGAGT AATGTATAAT GGACATATTA TAGAGGAAGG AAGTGGCATA
CTCAAATCCC CTATGCACCC CTATTCACAG TCTATCGTTC GCGGACACAA ACATCAAAGA
CCCGATCAGT CAATACCATC TCATGAATCC TGCCCATTTG TCCTACAATG TCCGAATAAA
ACAGAAAAAT GCCAAACAAT TCCGTCTGTA ACAGATTGCT CAGGAAGAAA AATACGATGT
CATCATCCAT TTAAGTATGA TTAG
|
|---|
| Protein sequence | MSGVSSIITG TGLGKIYQSG FFSHQKTFAV QDVDIEIKAG ETYALVGESG SGKTTLGKIL
LKLISPTTGR IFYHNEDITD LQGPELIPIR RKMQIIPQHP EDAFNPRWRL SRSIMEPFLI
HGQAQEKGGL KNVLLELLAE TGLNPDYAER YPHQLSGGEL QRAAIARALA LKPDFILCDE
PTSMLDVSVQ AAIIQLLLSL QKRSTISLLF ITHDLKLADH IADRVGVMYN GHIIEEGSGI
LKSPMHPYSQ SIVRGHKHQR PDQSIPSHES CPFVLQCPNK TEKCQTIPSV TDCSGRKIRC
HHPFKYD
|
|---|
| |