Gene Mhun_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_0197 
Symbol 
ID3923566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp222987 
End bp223814 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content45% 
IMG OID637895847 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_501690 
Protein GI88601512 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA GTACGATACT CTGCATTCCT GGAATTAAAG TTCTCATAAT CATCATATTG 
ATCGCAGTTG CGGTTCCGTT TCTCCTTCCT CATGACCCAA ACCGGGCTAA CCTGGAAGAG
GCTGAACAGC CACCTTCTCT TGATCACTGG TGTGGAACTG ATAAACTTGG CCGGGATGTC
TTTACCCGGA CGATATATGG CACAAGAATA TCACTTATTG TTGGTTTGAC TGCAGCCGTT
TTGGCCGTCT CAATGGGAGC CGGTATAGGA ATTACCGCAG GATTTATCGG GGGAAAAGTT
GATGGTCTGC TTATGAGAAT TGTAGATACG ATAAACTCTC CTCCTGAGGT TATCCTGCTT
ATTGTCCTTG CAACCATATT TCCCCGGAGT ATATTGACTA TAATTCTCAT TATTTCCCTG
ACTCACTGGA TGAGTACTTC ACGATTGATT CGGGGAGAGA CATTATCCAT TAAAGAGCGA
CCCTTTGTTG AGGCTGCGAT AGCTCTTGGG GCAGATGACC GGTATATCAT GAAAAGGCAT
ATTCTTCCGA ATCTGTATTC TATCCTGGTC ATTTCAGTTA CGCTTATGGC TGCTCATGCG
ATCATGATGG AGGCCATGCT GAGTTTTCTG GGGCTGGGGA TTCCTGCACA CATGGCCAGC
TGGGGGAATA TGCTCAACCA GGCACAAAGT GACGTCATGA GAGGAATATG GTGGACTTCT
ATATTCCCTG GGATAATGCT TGTTGCTACG GTATGGTCAA TATACCGCTT AGGTGAAGGA
TTAAAAGAGT ATCTGACACC ACACAGGGAT TTTTTATCCA GAATTTAA
 
Protein sequence
MKVSTILCIP GIKVLIIIIL IAVAVPFLLP HDPNRANLEE AEQPPSLDHW CGTDKLGRDV 
FTRTIYGTRI SLIVGLTAAV LAVSMGAGIG ITAGFIGGKV DGLLMRIVDT INSPPEVILL
IVLATIFPRS ILTIILIISL THWMSTSRLI RGETLSIKER PFVEAAIALG ADDRYIMKRH
ILPNLYSILV ISVTLMAAHA IMMEAMLSFL GLGIPAHMAS WGNMLNQAQS DVMRGIWWTS
IFPGIMLVAT VWSIYRLGEG LKEYLTPHRD FLSRI