Gene Mflv_5549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5549 
Symbol 
ID4976940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009339 
Strand
Start bp298359 
End bp299057 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID640459775 
ProductXRE family transcriptional regulator 
Protein accessionYP_001136798 
Protein GI145226144 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.361846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00439273 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGACA ACACCTCTGA CTTTTTCTCC GCCAAAGCAT TTCGCGAGGC CTGCGACAAG 
GCGGGGATGA CCAAGAAGGC GATCGCCGCC GGGCTGGGCG TGACTCCAAC GACGCTGAGC
AGTCTCTATA GCGGTCGTTC CACGCCTTCG CTCAAGCTGC TGACCAAGAT CGTGGACTTT
TTCGGTGGCG ATCTCGTCGA CTTTCTGGAG ATGCCGGCGC GGCAGCGTTG GGAGCTCAAG
CACTTCAGGA TCGCGGCCGG CCTCACCCAG GCTGCGCTGG CCAAGCGCAT CAATGTGGCA
CCCTCGGCGG TCTCGGGATG GGAGCTCGGC AAGTACTCCC CGCCGGCGGC GCTACGTCCG
GTGCTCGCCG ACCTATACGG CGTTCCCGAA TCAGACCTTC GGGAGGCAAT CACCGGTGGT
GAGACATCCG GGGCTGGAGT GCCGCCAGCG GCTGATGCAA CCTTGCAGAT GGCGGAGGCG
GTCCTGGGAT TTGCCGAGAG TGCGGTGCAG ATGGCGCGAG CCGACGGTGT GGCCGAGTCA
GCTCGTCTCG CGATGTACAC GGAGATTCAA GGTCGCGTCG AGCAGACGCT AACTTTGTTG
GCACCTTTGA TTCCGCAGCT CCCGGTATCC GAGCGCTCAT ATGCAATGTC CCTGGTCAGG
CGACTATCTG AAGTGCACGA CACAACGACT TCTCCGTAA
 
Protein sequence
MADNTSDFFS AKAFREACDK AGMTKKAIAA GLGVTPTTLS SLYSGRSTPS LKLLTKIVDF 
FGGDLVDFLE MPARQRWELK HFRIAAGLTQ AALAKRINVA PSAVSGWELG KYSPPAALRP
VLADLYGVPE SDLREAITGG ETSGAGVPPA ADATLQMAEA VLGFAESAVQ MARADGVAES
ARLAMYTEIQ GRVEQTLTLL APLIPQLPVS ERSYAMSLVR RLSEVHDTTT SP