Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_5549 |
Symbol | |
ID | 4976940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009339 |
Strand | + |
Start bp | 298359 |
End bp | 299057 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640459775 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001136798 |
Protein GI | 145226144 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.361846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00439273 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGACA ACACCTCTGA CTTTTTCTCC GCCAAAGCAT TTCGCGAGGC CTGCGACAAG GCGGGGATGA CCAAGAAGGC GATCGCCGCC GGGCTGGGCG TGACTCCAAC GACGCTGAGC AGTCTCTATA GCGGTCGTTC CACGCCTTCG CTCAAGCTGC TGACCAAGAT CGTGGACTTT TTCGGTGGCG ATCTCGTCGA CTTTCTGGAG ATGCCGGCGC GGCAGCGTTG GGAGCTCAAG CACTTCAGGA TCGCGGCCGG CCTCACCCAG GCTGCGCTGG CCAAGCGCAT CAATGTGGCA CCCTCGGCGG TCTCGGGATG GGAGCTCGGC AAGTACTCCC CGCCGGCGGC GCTACGTCCG GTGCTCGCCG ACCTATACGG CGTTCCCGAA TCAGACCTTC GGGAGGCAAT CACCGGTGGT GAGACATCCG GGGCTGGAGT GCCGCCAGCG GCTGATGCAA CCTTGCAGAT GGCGGAGGCG GTCCTGGGAT TTGCCGAGAG TGCGGTGCAG ATGGCGCGAG CCGACGGTGT GGCCGAGTCA GCTCGTCTCG CGATGTACAC GGAGATTCAA GGTCGCGTCG AGCAGACGCT AACTTTGTTG GCACCTTTGA TTCCGCAGCT CCCGGTATCC GAGCGCTCAT ATGCAATGTC CCTGGTCAGG CGACTATCTG AAGTGCACGA CACAACGACT TCTCCGTAA
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Protein sequence | MADNTSDFFS AKAFREACDK AGMTKKAIAA GLGVTPTTLS SLYSGRSTPS LKLLTKIVDF FGGDLVDFLE MPARQRWELK HFRIAAGLTQ AALAKRINVA PSAVSGWELG KYSPPAALRP VLADLYGVPE SDLREAITGG ETSGAGVPPA ADATLQMAEA VLGFAESAVQ MARADGVAES ARLAMYTEIQ GRVEQTLTLL APLIPQLPVS ERSYAMSLVR RLSEVHDTTT SP
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