Gene Mflv_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5253 
Symbol 
ID4976562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5600389 
End bp5601396 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content69% 
IMG OID640459482 
Producttrans-hexaprenyltranstransferase 
Protein accessionYP_001136505 
Protein GI145225827 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGACAC CGGCGAACGT GGTGGCGGGA GTGGACTTCG GCGATGCCCA ATTCGCCCAG 
GACGTCCGCG ACGGGGTTGC CCGTATCGAG GCTCTGATGT CCGAGGAGCT GGGCAGGGCC
GACGCCCTGA TGTCAGAGGC GGTCAACCAT CTCTTCCAGG CGGGCGGCAA GCGTTTCCGG
CCGCTGTTCA CCGTGCTGTC GGCCCAACTC GGTCCCGAGC CGGACGCGTG GCAGGTCACC
GTCGCCGGCG CCGTGATCGA GCTGGTGCAC CTGGCCACGC TGTATCACGA CGATGTCATG
GACGAGGCCC AGGTCCGCCG CGGTGCGCCC AGCGCCAACG CCCGGTGGGG TAACAACATC
GCGATCCTGG CCGGCGACTA CCTGTTCGCG ACGGCCTCGC GCCTGACCAG CCGGCTGGGC
CCCGAGGCGG TGCGCATCAT CGCCGACACG TTCGCTCTGC TCGTGACGGG CCAGATGCGC
GAGACCCGCG GCGCCGCCGA TCAGGTCGAT TCGGTCGACC ACTACCTGAA GGTCGTCTAC
GAGAAGACGG CCTGTCTGAT CTCGGCGTCG GGACGGTTCG GGGCGACGTT CTCCGGCTCC
GACGAGGCGC AGATCGAACG GCTCGCCAAG CTCGGCGGGA TCGTCGGCAC CGCGTTCCAG
ATCTCCGACG ACATCATCGA CATCGACAGC GACGCCGACG AGTCGGGCAA GGTTCCCGGC
ACCGACCTGC GCGAGGGTGT GCACACTCTG CCGGTGCTGT ACGCGTTGCG CGAAACCGGT
CCGGACGCCG ACCGGTTGCG CGAGCTGCTG GCCGGTCCGG TCACCGACGA CGCCGACGTC
GCCGAGGCGT TGCGCCTGCT GCGCGGGTCG CAGGGCATCC GCAAGGCCAA GGAGACGGTC
ATCGGGTACG CGCAGGAAGC GCAGCGGGAG CTCGACCAGC TCCCGGACGT GCCGGGCCGT
CAGGCGCTCG CGAGCCTGGT CGACTACACC GTCAATCGGC ACGGCTAG
 
Protein sequence
MRTPANVVAG VDFGDAQFAQ DVRDGVARIE ALMSEELGRA DALMSEAVNH LFQAGGKRFR 
PLFTVLSAQL GPEPDAWQVT VAGAVIELVH LATLYHDDVM DEAQVRRGAP SANARWGNNI
AILAGDYLFA TASRLTSRLG PEAVRIIADT FALLVTGQMR ETRGAADQVD SVDHYLKVVY
EKTACLISAS GRFGATFSGS DEAQIERLAK LGGIVGTAFQ ISDDIIDIDS DADESGKVPG
TDLREGVHTL PVLYALRETG PDADRLRELL AGPVTDDADV AEALRLLRGS QGIRKAKETV
IGYAQEAQRE LDQLPDVPGR QALASLVDYT VNRHG