Gene Mflv_5086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5086 
Symbol 
ID4976397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp5399875 
End bp5401533 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content69% 
IMG OID640459313 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001136340 
Protein GI145225662 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.480357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.429273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACA CGCATGTCGT CACCAACCAG GTTCCTCCGC TCGTGGACTT CAACCCGGCC 
GCGTCGCCGG TGCTCGCCGA ATCGCTGGTC CGCGAGGGAG GCGGGTGGGG TGCAGACGAG
GTCGCCGACT TGGGCGCGCT GGCCGGCTCG GACCGGGCGC AGCGCTGGGG TGACCTCGCC
GATCGCCACC GCCCGGTCCT GCACACCCAC GATCGGTACG GCCACCGCGT CGACGAAGTG
GAGTACGACC CGGCCTACCA CGAGCTGATG TCGGTGGCCG TAGCCCACGG GTTGCACGCC
GCGCCCTGGG CCGACGACCG CGCCGGCGCG CACGTGGTGC GCGCTGCCAA GACCTCGGTG
TGGACGCCCG AACCCGGCCA CATGTGCCCG ATCTCGATGA CCTACGCGGT GGTGCCGGCG
TTGCGGCACA ACCCAGAGCT CGCAGCGATC TACGAGCCGC TGCTGACCAG TCGCGACTAC
GACCCCGAGT TGAAGCTGCC GACCACCAAG GCCGGGATCA CCGCCGGAAT GTCGATGACC
GAGAAGCAGG GCGGCTCAGA CGTGCGCGCC GGGACGACCC AGGCGACGCC GAACGGCGAC
GGCAGCTACT CGCTGCGCGG GCACAAGTGG TTCACTTCGG CGCCGATGTG CGATGTCTTC
CTCGTCCTGG CCCAGGCCGC AGGACGGGGC GAGCGAAGCG ACGGGGGATC AGGAGGTTTG
AGTTGCTTCT TCCTCCCGCG GATCCTGCCC GACGGAACCC GAAACCGAAT GTTCCTGCAG
CGGCTGAAGG ACAAGCTCGG CAACCATGCC AATGCGTCCA GCGAGGTGGA GTACGACGGG
GCGACGGCGT GGCTCGTCGG TGAGGAAGGT CGCGGTGTGG CGACCATCAT CGAGATGGTG
AACCTCACGC GGCTGGACTG CACGCTGGGC AGCGCGACGA GCATGCGCAA CGGCCTGATG
CGAGCCGCCC ACCACGCGCA GCACCGCTCG GCGTTCGGCG CCTACCTGAT CGACCAGCCA
CTGATGCGCA ACGTCCTGGC CGACCTCGCC GTGGAAGCGG AGGCGGCGAC CATGCTTGCG
ATGCGGATGG CCGGCGCCAC CGATCATGCC GTGCGCGGCG ACGAACGCGA AACTCTCTTG
CGCAGAATCG GTTTGGCGGC CGCCAAATAC TGGGTCTGCA AGCGCGCCAC CCCGCATGCC
GCGGAGGCCA TGGAGTGCTT CGGCGGCAAC GGCTACGTGG AGGATTCCGG CATGCCCCGG
CTCTACCGGG AGGCGCCGCT GATGGGCATC TGGGAAGGAT CCGGAAACGT CAGTGCGCTG
GACACCCTGC GCGCCATGGC AACCCGACCT GAATGTGTCG ACGTGCTGTT CGACGAACTC
GGCATCGCGA CGGGCCACGA CCCGCGCCTG GACCGCCACG TCGCCGGGCT CAGGCCACAA
TTCGACGACC TGGAGTCGAT CCAGTACCGA GCCCGTCAGG TCGCCGAGGA CATCTCGTTG
GCGTTGCAGG GGTCCCTCCT GGTGCGCCAC GGCCACCCTG CGGTGGCCGA GGCGTTCCTG
GCCAGCAGGC TCGACGGGCA GTGGGGCGGT GCCTTCGGAA CGTTGCCGAC CGGTCTGGAC
CTGGCCCCGA TCCTCGATCG GGCACTGGTG AAGGCCTGA
 
Protein sequence
MQDTHVVTNQ VPPLVDFNPA ASPVLAESLV REGGGWGADE VADLGALAGS DRAQRWGDLA 
DRHRPVLHTH DRYGHRVDEV EYDPAYHELM SVAVAHGLHA APWADDRAGA HVVRAAKTSV
WTPEPGHMCP ISMTYAVVPA LRHNPELAAI YEPLLTSRDY DPELKLPTTK AGITAGMSMT
EKQGGSDVRA GTTQATPNGD GSYSLRGHKW FTSAPMCDVF LVLAQAAGRG ERSDGGSGGL
SCFFLPRILP DGTRNRMFLQ RLKDKLGNHA NASSEVEYDG ATAWLVGEEG RGVATIIEMV
NLTRLDCTLG SATSMRNGLM RAAHHAQHRS AFGAYLIDQP LMRNVLADLA VEAEAATMLA
MRMAGATDHA VRGDERETLL RRIGLAAAKY WVCKRATPHA AEAMECFGGN GYVEDSGMPR
LYREAPLMGI WEGSGNVSAL DTLRAMATRP ECVDVLFDEL GIATGHDPRL DRHVAGLRPQ
FDDLESIQYR ARQVAEDISL ALQGSLLVRH GHPAVAEAFL ASRLDGQWGG AFGTLPTGLD
LAPILDRALV KA