Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_5086 |
Symbol | |
ID | 4976397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 5399875 |
End bp | 5401533 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640459313 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001136340 |
Protein GI | 145225662 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.480357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.429273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACA CGCATGTCGT CACCAACCAG GTTCCTCCGC TCGTGGACTT CAACCCGGCC GCGTCGCCGG TGCTCGCCGA ATCGCTGGTC CGCGAGGGAG GCGGGTGGGG TGCAGACGAG GTCGCCGACT TGGGCGCGCT GGCCGGCTCG GACCGGGCGC AGCGCTGGGG TGACCTCGCC GATCGCCACC GCCCGGTCCT GCACACCCAC GATCGGTACG GCCACCGCGT CGACGAAGTG GAGTACGACC CGGCCTACCA CGAGCTGATG TCGGTGGCCG TAGCCCACGG GTTGCACGCC GCGCCCTGGG CCGACGACCG CGCCGGCGCG CACGTGGTGC GCGCTGCCAA GACCTCGGTG TGGACGCCCG AACCCGGCCA CATGTGCCCG ATCTCGATGA CCTACGCGGT GGTGCCGGCG TTGCGGCACA ACCCAGAGCT CGCAGCGATC TACGAGCCGC TGCTGACCAG TCGCGACTAC GACCCCGAGT TGAAGCTGCC GACCACCAAG GCCGGGATCA CCGCCGGAAT GTCGATGACC GAGAAGCAGG GCGGCTCAGA CGTGCGCGCC GGGACGACCC AGGCGACGCC GAACGGCGAC GGCAGCTACT CGCTGCGCGG GCACAAGTGG TTCACTTCGG CGCCGATGTG CGATGTCTTC CTCGTCCTGG CCCAGGCCGC AGGACGGGGC GAGCGAAGCG ACGGGGGATC AGGAGGTTTG AGTTGCTTCT TCCTCCCGCG GATCCTGCCC GACGGAACCC GAAACCGAAT GTTCCTGCAG CGGCTGAAGG ACAAGCTCGG CAACCATGCC AATGCGTCCA GCGAGGTGGA GTACGACGGG GCGACGGCGT GGCTCGTCGG TGAGGAAGGT CGCGGTGTGG CGACCATCAT CGAGATGGTG AACCTCACGC GGCTGGACTG CACGCTGGGC AGCGCGACGA GCATGCGCAA CGGCCTGATG CGAGCCGCCC ACCACGCGCA GCACCGCTCG GCGTTCGGCG CCTACCTGAT CGACCAGCCA CTGATGCGCA ACGTCCTGGC CGACCTCGCC GTGGAAGCGG AGGCGGCGAC CATGCTTGCG ATGCGGATGG CCGGCGCCAC CGATCATGCC GTGCGCGGCG ACGAACGCGA AACTCTCTTG CGCAGAATCG GTTTGGCGGC CGCCAAATAC TGGGTCTGCA AGCGCGCCAC CCCGCATGCC GCGGAGGCCA TGGAGTGCTT CGGCGGCAAC GGCTACGTGG AGGATTCCGG CATGCCCCGG CTCTACCGGG AGGCGCCGCT GATGGGCATC TGGGAAGGAT CCGGAAACGT CAGTGCGCTG GACACCCTGC GCGCCATGGC AACCCGACCT GAATGTGTCG ACGTGCTGTT CGACGAACTC GGCATCGCGA CGGGCCACGA CCCGCGCCTG GACCGCCACG TCGCCGGGCT CAGGCCACAA TTCGACGACC TGGAGTCGAT CCAGTACCGA GCCCGTCAGG TCGCCGAGGA CATCTCGTTG GCGTTGCAGG GGTCCCTCCT GGTGCGCCAC GGCCACCCTG CGGTGGCCGA GGCGTTCCTG GCCAGCAGGC TCGACGGGCA GTGGGGCGGT GCCTTCGGAA CGTTGCCGAC CGGTCTGGAC CTGGCCCCGA TCCTCGATCG GGCACTGGTG AAGGCCTGA
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Protein sequence | MQDTHVVTNQ VPPLVDFNPA ASPVLAESLV REGGGWGADE VADLGALAGS DRAQRWGDLA DRHRPVLHTH DRYGHRVDEV EYDPAYHELM SVAVAHGLHA APWADDRAGA HVVRAAKTSV WTPEPGHMCP ISMTYAVVPA LRHNPELAAI YEPLLTSRDY DPELKLPTTK AGITAGMSMT EKQGGSDVRA GTTQATPNGD GSYSLRGHKW FTSAPMCDVF LVLAQAAGRG ERSDGGSGGL SCFFLPRILP DGTRNRMFLQ RLKDKLGNHA NASSEVEYDG ATAWLVGEEG RGVATIIEMV NLTRLDCTLG SATSMRNGLM RAAHHAQHRS AFGAYLIDQP LMRNVLADLA VEAEAATMLA MRMAGATDHA VRGDERETLL RRIGLAAAKY WVCKRATPHA AEAMECFGGN GYVEDSGMPR LYREAPLMGI WEGSGNVSAL DTLRAMATRP ECVDVLFDEL GIATGHDPRL DRHVAGLRPQ FDDLESIQYR ARQVAEDISL ALQGSLLVRH GHPAVAEAFL ASRLDGQWGG AFGTLPTGLD LAPILDRALV KA
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