| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5026 |
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| Symbol | |
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| ID | 4976337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | - |
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| Start bp | 5350108 |
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| End bp | 5351895 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640459253 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_001136280 |
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| Protein GI | 145225602 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.025113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.110244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCTC TGCTGTCCGG CGTGCCCGGG TTCGACGACG TCCGCCACTT CGCCCGCAAG
CTCGACACCG CCCGCCATCA GGGTGTCCCG GACGGCTGCA TCCTGGAGCT CGACCTGCAG
AGCGCCCCGC CGGAGTCGGC CGGGTTCGAC CCGGTCGCCC TGCTCAGCGG TGCGGGCCGC
CCACTGCTGC TTCGCGAGGC GGTCTCTGCG CTGCACCGCG CCGCCGAGGA TCCGCGGGTG
GCCGGCCTGA TCGCGCGGGT GCAGATCGAC GCCGCCGCAC CGGGGGCGGT GCAGGAGCTG
CGCGAGGCCA TCGTCGCGTT CACCGCGAAG AAGCCGTCGC TGGCGTGGGC GGAGACCTAC
CCCGGCACCC TGTCGTACTA CCTGGCGTCG GCGTTCGGCG AGGTCTGGAT GCAGCCGTCG
GGCACGCTCG GCCTGGTCGG CTTCGCCACC AACGCCCTCT TCCTGCGCGA CGCCCTCGAC
AAGCTCGGGG TGGAAGCCCA GTTCATCGCC AAAGGTGAGT ACAAGTCGGC GCCCAACCTG
TTCACCGAGG ACCGCTACAC CGAACCGCAC CGCGAAGCCG ACACCGCGCT GGTCAACGGC
CTGCGTACCC AGGTCTGGGA TGCGGTGGCC GCGTCCCGCG GCATCGACGT CGCCACACTC
GACGCGCTGG CCGACCGGGC GCCGCTGCTG CGCGACGACG CGGTGACGGC GGGGCTGATC
GACCGGGTCG GGTTCCGGGA CGAGGCGTAC GCCCGGATCG CCGACATGGC GGGCGCCGAC
GGGGTGTCGC CGGAGACCGG CAGCGGCGGG ATCGATCCGG ACGGGGACGA CGCCCCGCCG
CGGCTGTACC TGACGCGCTA CGCGCGGGCC AAGCGCCCCA CGGTGCCGGG CCTTCCCAAC
CGGCGTCGGA TCGCCGTGGT CACCGTGCAC GGGCCGATCG TCAGCGGTCG CGGCGGCCGG
CAGATGTCGC CGCGGGGCGG CTCCAACGCC GGTGGCGACA CGATCGCCGC GGCGCTGCGC
GAGGCGGCCG CCGACGACGA CGTCGCGGCG ATCGTGGTGC GCGTCGACAG TCCCGGCGGA
TCGGTGACCG CGTCGGAAAC CATCTGGCGG GAAGTGGTGC GGGCCCGCGA GAGCGGCACG
CCGGTCGTCG CGTCGATGGG GTCGGTCGCC GCGTCGGGTG GTTACTACGT GTCGATGGCG
GCCGACGCGA TCGTCGCGAA CCCGGCCACC ATCACCGGGT CCATCGGTGT CGTGACGGGC
AAGCTGGTGG CCCGCGACCT CAAGGAGCGT CTCGGCGTCG GGTCGGATTC GGTGCGCACC
AACGCCAACG CCGACGCGTG GTCGATCAAC GCGCCGTTCA CCGAGGAGCA GCATGCGCAG
GTGGCCGCCG AGGCGGACCT GTTCTACGAC GACTTCGTTG CCCGCGTCGC CGAGGGTCGC
GGGCTCAGTG TCGACGCGGT GGAGAAGGTG GCCCGCGGCC GGGTGTGGAC CGGTGCCGAC
GCGTTGGATC GGGGTCTGGT CGACGAGCTG GGCGGACTGC GCACGGCCGT GACCCGGGCC
AAGGCGCTCG CCGGCATCGA CGAGGACACC AAGGTGGAGC TGCAGATGCT GCCCGGTGCG
TCGCTGCGGG ATGTGCTGCG GCCCAAGCCC TCCTCGCAAC CGGCGGCGGC GTCGCTGCCG
GAGTTGCTGG GCGCGTTGGC GATTCAGTCG GTCGCCGGAG TGGTCGATCA GACGCAGCGG
TCCCTGTCCG GGGTCAACGC GCTGTGGACG GGGAACCCCC GGTTCTAG
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| Protein sequence | MLALLSGVPG FDDVRHFARK LDTARHQGVP DGCILELDLQ SAPPESAGFD PVALLSGAGR
PLLLREAVSA LHRAAEDPRV AGLIARVQID AAAPGAVQEL REAIVAFTAK KPSLAWAETY
PGTLSYYLAS AFGEVWMQPS GTLGLVGFAT NALFLRDALD KLGVEAQFIA KGEYKSAPNL
FTEDRYTEPH READTALVNG LRTQVWDAVA ASRGIDVATL DALADRAPLL RDDAVTAGLI
DRVGFRDEAY ARIADMAGAD GVSPETGSGG IDPDGDDAPP RLYLTRYARA KRPTVPGLPN
RRRIAVVTVH GPIVSGRGGR QMSPRGGSNA GGDTIAAALR EAAADDDVAA IVVRVDSPGG
SVTASETIWR EVVRARESGT PVVASMGSVA ASGGYYVSMA ADAIVANPAT ITGSIGVVTG
KLVARDLKER LGVGSDSVRT NANADAWSIN APFTEEQHAQ VAAEADLFYD DFVARVAEGR
GLSVDAVEKV ARGRVWTGAD ALDRGLVDEL GGLRTAVTRA KALAGIDEDT KVELQMLPGA
SLRDVLRPKP SSQPAAASLP ELLGALAIQS VAGVVDQTQR SLSGVNALWT GNPRF
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