Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_4885 |
Symbol | |
ID | 4976196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 5206047 |
End bp | 5206607 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640459112 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_001136139 |
Protein GI | 145225461 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0039281 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGACAGCA CACACCCCCG CGAGGCCGAC CGCGAGTTCG ACGGGCACGA CTTTTGCGAC GCTGACCTCA GCGGTCTGCG CACCGAACGC GTCGTCTACA CCGAGTGCGA CTTCACCGGT GCCGACCTGT CGGACTCCGA CCACACCGGA TCGGCGTTCC GCAACTGCAC ATTCCGTCGG ACATCGTTGT GGCACAGTAC ATTCCGGCAC TGCAGCTTCC TGGGCTCGAC GTTCACCGAA TGTCGGCTGC GCCCGCTGAC GCTGGTGGAG GTCGACTTCA CGCTGGCGGT GCTGGCCGGG GTGGACCTGC GCAAGACGGA TTTGTCGGAC TGCCGGTTGC GGGAGACCAG CCTGGTGGGC ACCGACCTGC GTGAGGCGGT GCTGGCACAC GCCGATCTGA CCGGTGCCAG GGTGCAGGAC GCCAAGTTCG ACGGTGCCGA TCTGCGCGGC GCTCGTGTCG ACCCCACGTT CTGGACCACC GCCAGACTTC GTGCCGCGAA GGTCGACCTC CCCCAGGCGC TCGCGTTCGC CGCGGCCCAC GGCCTCGATA TCGGCGGCTG A
|
Protein sequence | MDSTHPREAD REFDGHDFCD ADLSGLRTER VVYTECDFTG ADLSDSDHTG SAFRNCTFRR TSLWHSTFRH CSFLGSTFTE CRLRPLTLVE VDFTLAVLAG VDLRKTDLSD CRLRETSLVG TDLREAVLAH ADLTGARVQD AKFDGADLRG ARVDPTFWTT ARLRAAKVDL PQALAFAAAH GLDIGG
|
| |