| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4585 |
|---|
| Symbol | |
|---|
| ID | 4975897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 4878056 |
|---|
| End bp | 4878595 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640458813 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001135841 |
|---|
| Protein GI | 145225163 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.887435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.300583 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGTGGT GGCACGATTT CAAGAGTCGT GCAGTTGTCG AGGATGGCGA CGATCTCCAG
CAGCACCACC CGTGGTGCCT AGGCTGCGGC AAAGACAATC CACACGGTCA TGGCCTGCGA
GCGCGTCGGC GTGGCAACGG GGTGATTGCC AGGCATGTCT TCGATGGCCG ACATCGCGGC
GCACCCGGGA TCGCGCATGG CGGAGCGGTC ATTACAGTTC TCGACGACAT GGTGGGGATG
CTGCTCTACG TCGTCGGTGA GATGGCCGTC ACCCGCAAAC TGAACACCGA GTTCTTTGCG
CCGGTGCTGC TTCATACGCA GTATTTAGTC AGCGCGGACC TCGTGTCTCG GACCGGCCGA
AGACTCGAAG TCAGGGCAGA ACTGAGGGAG GAAACCACCC AGAAGCTAGT GGCCTCCGCG
GACGGGTTAT TCGTGGTCGT TACGCTTGTG CACTTCACCG ATGCCGCAGG CAAGGGCCCT
CCGGCACGCA ATGGGGAAAA CGACGACTCG CGCGAGGCGA TGGGAAACCG TCATCCTTGA
|
|---|
| Protein sequence | MAWWHDFKSR AVVEDGDDLQ QHHPWCLGCG KDNPHGHGLR ARRRGNGVIA RHVFDGRHRG
APGIAHGGAV ITVLDDMVGM LLYVVGEMAV TRKLNTEFFA PVLLHTQYLV SADLVSRTGR
RLEVRAELRE ETTQKLVASA DGLFVVVTLV HFTDAAGKGP PARNGENDDS REAMGNRHP
|
|---|
| |