Gene Mflv_4571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4571 
Symbol 
ID4975883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4865856 
End bp4867199 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content65% 
IMG OID640458799 
Productdiguanylate phosphodiesterase 
Protein accessionYP_001135827 
Protein GI145225149 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.300583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCC TTCGTCCTAC GGTGCCCGGG CTCAGCGGTG GAAACATCGT GCGTGACCTC 
GTCGGTGAGC TGATCGCCTC GATCGATCCA CAGTCGCTGC TGCAGCGGAT CGTCGAGCAG
GTGTGTGTCC GTATGCCGAC CGCGTCGGGG GCGTCGGTGG CGTTGAAGAC GCCCGGCGAC
TTCCTGGAGG TCCTGGCGAC CTACGGCGCG ACGGGGACCC TGAAGGGACG TGTGGTGCCG
ATCGACGACA CCTTCCAGGT CTATCCGCTC GGGTCGGGAC GACCTGAGAT CGTCGACGAC
ACCGCGACCG ATGCGCGTAT TACCCCGCAG GTGCGCGAGC TGAGTCAGCA GCTCGGCGTC
CGCAGCTGTT TGTCCATTCC GCTGATCAGC GAGGGCTCGG CGATCGGGAC GCTGTCCGTC
GTGGCGCACG AGCCGTACGC GTTCGGCGCG AGCGACGTCG CTCCGGTCTC GGCGGTCGCC
GAGTTCCTCG GTGTATTGAT CAGCGCGAGT ACGCAACTGG CCGCCCTGCT CAAGGATCTG
TTGGGCGCGG GCTCGATCCG GGTCGACTCG CGGGCGGCAG CGGATCTGCT GGCGTCGGTG
CTCCTTCCCG AACTCTCCGA GCGTGATGAA CTCCGGCGGG TCATCGACGA CGTGGTGATG
GCGGGCGAGA TCGTTCCGGT CTTCCAGCCG ATCTTCGATC TCATCACCGG CGAGGTGATC
GGCTTTGAGG GGTTGAGCCG ATTCAGGTGC GAGCCCACAC GCAGTCCCGA CAAATGGATT
GCGCTGGCGC ACAATGTCCG TCGGGGTATC GATGTCGAGC TCAAGGCTCT TCGGGCACTG
TTGAAGGGGG CGCTTTCGAT ACCCGACAAG TATCTGGTCT CGGTGAATCT CAGTCCGCTC
GCACTCGCCG ATCCGATCAT TCAGCAGGAG TTGCTGTCGT ATCCGCGGGG CGTGGTCGTC
GAACTCACCG AACGCGAACC CGCTCCGGAA CTTCTCGGCG AGAGTGTGGA GCCGTTGCGT
CAGAGTGGGA TTCGCCTCGC CATCGATGAC GCCGGTAGTG GATTTGCGGG GCTGACGACC
ATCCTGCGCC TGCGGCCCGA CATCATCAAA CTCGACCGGG AGCTGACCGT CGGCATCGAC
ACCGACCCGA GTCGACGGGC GCTGGCGACG GCGCTGACCC ACTTCGCCCG TGAGATCGAC
GCATATACCG TCGCCGAGGG CATCGAGACC GAGGTGCAGA TGCAGTTGCT GCGCGACATC
GGGATCCGTT ATGGGCAGGG GTATTTCCTC GGCCGCCCGC AACCTGTGGA CGTGTTCGAG
GAATCACTCT TCTCGCGTGC GTAG
 
Protein sequence
MRGLRPTVPG LSGGNIVRDL VGELIASIDP QSLLQRIVEQ VCVRMPTASG ASVALKTPGD 
FLEVLATYGA TGTLKGRVVP IDDTFQVYPL GSGRPEIVDD TATDARITPQ VRELSQQLGV
RSCLSIPLIS EGSAIGTLSV VAHEPYAFGA SDVAPVSAVA EFLGVLISAS TQLAALLKDL
LGAGSIRVDS RAAADLLASV LLPELSERDE LRRVIDDVVM AGEIVPVFQP IFDLITGEVI
GFEGLSRFRC EPTRSPDKWI ALAHNVRRGI DVELKALRAL LKGALSIPDK YLVSVNLSPL
ALADPIIQQE LLSYPRGVVV ELTEREPAPE LLGESVEPLR QSGIRLAIDD AGSGFAGLTT
ILRLRPDIIK LDRELTVGID TDPSRRALAT ALTHFAREID AYTVAEGIET EVQMQLLRDI
GIRYGQGYFL GRPQPVDVFE ESLFSRA