Gene Mflv_4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4116 
Symbol 
ID4975430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4366339 
End bp4367529 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content71% 
IMG OID640458342 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001135374 
Protein GI145224696 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGTC CGCTGGAGGG CATCAGGGTC GTCGAGCTCG GGGTGTGGGT GGCGGGCCCC 
GCGGCCGGCG GCATCCTCGC GGACTGGGGC GCCGACGTCG TCAAGATCGA GCCGCCCACC
GGCGATCCGG CCCGCACGTT CGGGCGAATG CTCGGCATCC CGCCGCAGGA CCGCCATCAC
GTCAGCCCGC CGTTCCAGAT GGACAACCGT GGGAAGCGCA GCGTCGTGCT CGACCTGGCG
TCGCCGGACG GGCGACGCAG CGCGCGCGAG CTGATCGACG GGGCCGATGT CTTCGTGACC
AACATCCGCG TGGGCGGCCT CCGGCGCATC GGTCTGGATT TCGAGGCGCT GGCCGCGGCG
AACCCGCGGC TGGTCTACGG GTTGATCACC GGCTACGGCA CCGAGGGGCC CGACGCGGAC
CGGCCGGCCT TCGACGTCGC GGCGTTCTGG GCGCGGGCGG GCCTCGCCCA TCTGCTCACC
CGTCCCGGCG ATGTGCCTCC GTTCCAGCGC GGCGGGATGG GCGACCACAT GGCGGGGATG
ACGCTGGCCG GCGCGATCTG TGCCGCGCTG GTCGCGCGGG CGCGCACCGG AACCGGGCAG
TTGGTGTCGA CGTCGCTGTA CCGGCAGGGC GCCTACACCG TGAGCTTCGA CCTGACGACG
TTCCTGATCA CCGGCAATCC CATCGCGATC GGGCAACGTG AGGTGATGGG CAACCCGTGT
ATGAACAACT ACAGCGCTGC CGACGGCAAG CGCTTCTGGC TCGTCGGCCT GCAGGGGGAT
CGGCACTGGC CCGCGCTGTG CGCGGCGGTG CAGCGGCCGG ATTGGCCGAC CGACGAACGC
TTCGCCACGG GCCGGGCGCG GGCGGCCAAC GCCGCCGAGC TGATCGCCGA GCTCGACGCC
ATCTTCGCCC GCAGAACGCT GGCGGAGTGG ACGGAGGTGT TCGCCGCGCA CCCCGATCTG
TTCTGGTCGC CGATCAACTC GATGGAGGAC GTGATCGGCG ACGAGCAGTT CCACGCCGCG
GGCGGGATCG TCTACGTTCC CGACGACGAG GCCGGGTCGG TCCCGATGGT GGCCACACCG
GCGGACTTTC ACGGCACACC GGCGCAGATA CGCTGCAGCG CACCGGAACT CGGGGCGCAC
ACCGAGGAGG TGCTCACCGA GCTCGCTCAG CGCACGAATC GCTCGACGTA G
 
Protein sequence
MAGPLEGIRV VELGVWVAGP AAGGILADWG ADVVKIEPPT GDPARTFGRM LGIPPQDRHH 
VSPPFQMDNR GKRSVVLDLA SPDGRRSARE LIDGADVFVT NIRVGGLRRI GLDFEALAAA
NPRLVYGLIT GYGTEGPDAD RPAFDVAAFW ARAGLAHLLT RPGDVPPFQR GGMGDHMAGM
TLAGAICAAL VARARTGTGQ LVSTSLYRQG AYTVSFDLTT FLITGNPIAI GQREVMGNPC
MNNYSAADGK RFWLVGLQGD RHWPALCAAV QRPDWPTDER FATGRARAAN AAELIAELDA
IFARRTLAEW TEVFAAHPDL FWSPINSMED VIGDEQFHAA GGIVYVPDDE AGSVPMVATP
ADFHGTPAQI RCSAPELGAH TEEVLTELAQ RTNRST