| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3987 |
|---|
| Symbol | |
|---|
| ID | 4975302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 4243418 |
|---|
| End bp | 4244236 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640458214 |
|---|
| Product | phage shock protein A, PspA |
|---|
| Protein accession | YP_001135246 |
|---|
| Protein GI | 145224568 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.935035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.359806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATC CGTTCACCAA GGCGTGGAAG TACCTGATGG CGCTGTTCAG CTCCAAGGTC
GACGAGTATG CCGACCCGAA GGTGCAGATC CAGCAGGCCA TCGAGGAGGC GCAGCGCCAG
CATCAGGCAC TGACGCAGCA GGCGGCCCAG GTGATCGGCA ACCAGCGTCA GCTGGAGATG
CGGCTCAACC GCCAGCTCGC CGACATCGAG AAGCTGCAGG TCAACGTCCG CCAGGCACTG
ACGCTGGCCG ACCAGGCCGT GGCCGCCGGC GATACGAACA AGGCGACCGA GTACAACAAC
GCCGCCGAGG CGTTCGCCGC GCAGCTGGTG ACCGCCGAGC AGAGCGTCGA GGACCTCAAG
GGTCTGCACG ACCAGGCGTT GCAGGCCGCG GGTCAGGCCA AGAAGGCCGT CGAACAGAAT
GCGATGATGC TGCAGCAGAA GGTCGCCGAG CGCACCAAGC TGCTGTCCCA GCTGGAGCAG
GCCAAGATGC AGGAGCAGGT CAGCTCGTCG CTGCGGTCGA TGAGCGAGCT CGCCGCGCCC
GGGAACACGC CGAGCCTCGA CGAGGTGCGC GACAAGATCG AACGTCGCTA CGCCAACGCG
ATCGGCTCGG CCGAATTGGC GCAGAACTCC GTGCAGGGCC GGATGCTCGA AGTGCAGCAG
GCCAGCGTCC AGATGGCCGG GCACTCGCGT CTGGAGCAGA TCCGGGCCTC GATGCGCGGT
GAGCAGCTGC CCGCCGGGGG CAACGCCGCG GCCGCGCCGA ACCCGACCCC GGCGGCCCCG
GCCGCCAACC CGGCGCCGGA AAACCCGTTG TCGCAGTAA
|
|---|
| Protein sequence | MANPFTKAWK YLMALFSSKV DEYADPKVQI QQAIEEAQRQ HQALTQQAAQ VIGNQRQLEM
RLNRQLADIE KLQVNVRQAL TLADQAVAAG DTNKATEYNN AAEAFAAQLV TAEQSVEDLK
GLHDQALQAA GQAKKAVEQN AMMLQQKVAE RTKLLSQLEQ AKMQEQVSSS LRSMSELAAP
GNTPSLDEVR DKIERRYANA IGSAELAQNS VQGRMLEVQQ ASVQMAGHSR LEQIRASMRG
EQLPAGGNAA AAPNPTPAAP AANPAPENPL SQ
|
|---|
| |