| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3971 |
|---|
| Symbol | |
|---|
| ID | 4975286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4230357 |
|---|
| End bp | 4231232 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640458198 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001135230 |
|---|
| Protein GI | 145224552 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGCT CTGTTCTCTT CGACGCCCCC GGGCCGCGCG CACGGGTCCG CAACCGGGTG
ATCACGGCGG TCACCGTCGT CGCGGTCCTC GCCGTCGCGT GGGTCGTCTA CTCCCGGCTG
GACGAGCGGG GTCAGCTCAC CGCCGAGAAG TGGGAGCCGT TCCTGACCGG GGATCTGTGG
CGCACCTACG TGCTGCCCGG CATCGAGGGC ACGCTGACCG CCGCGGCGGT CTCGATCGTG
CTCGCGTTGA TCCTGGGATT CGTGCTCGGG GTGGGCAGGT TGTCGACGCA CACCCCGATC
CGCTGGGTGT CGTCGGTGCT GGTCGAGTTC TTCCGCGCGG TCCCGGTGCT GATCATGATG
ATCTTCGCGT ACTTCCTGTA CGCGTTCTAC GACGTCTTCC CGTCCAAGTA CCTGGCACTG
GCCGGCGTCA TCACGGGCCT GACGCTCTAC AACGGTGCGG TGATCGCCGA GATCGTCCGC
GCCGGGGTGC ACGCACTGCC CCGCGGTCAA GCCGAGGCGT CATCGGCACT GGGCCTGACC
TGGGGGCAGA CAATGCGCTC GATCCTGCTC CCCCAGGCCG TCACGTCGAT GCTCCCGGTG
CTGATCTCAC AGTTGGTGGT GGTGCTGAAG GACACCGCGC TCGGCTACCA GATCACGTTC
GTCGAGATGG TGCGTCAGGG AACGGTGATC GGCTCGGCCT ACGGAAACTA CATCCCCGCG
CTGATCGTGA TCGCGGTCCT GATGATCGCG CTGAACTTCT CGCTGTCGTG GTTCGCGACC
TGGCTGGAGA AACGGATGCG TCGGTCGCGC AAGGGGCCGG CACCGATGGA GGCCGAGCCG
CTCGAACTGC AGGGCGACCG CAGCCGCGGC GTCTGA
|
|---|
| Protein sequence | MAGSVLFDAP GPRARVRNRV ITAVTVVAVL AVAWVVYSRL DERGQLTAEK WEPFLTGDLW
RTYVLPGIEG TLTAAAVSIV LALILGFVLG VGRLSTHTPI RWVSSVLVEF FRAVPVLIMM
IFAYFLYAFY DVFPSKYLAL AGVITGLTLY NGAVIAEIVR AGVHALPRGQ AEASSALGLT
WGQTMRSILL PQAVTSMLPV LISQLVVVLK DTALGYQITF VEMVRQGTVI GSAYGNYIPA
LIVIAVLMIA LNFSLSWFAT WLEKRMRRSR KGPAPMEAEP LELQGDRSRG V
|
|---|
| |