| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3926 |
|---|
| Symbol | |
|---|
| ID | 4975241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 4188183 |
|---|
| End bp | 4190177 |
|---|
| Gene Length | 1995 bp |
|---|
| Protein Length | 664 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640458153 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001135185 |
|---|
| Protein GI | 145224507 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.036267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.618812 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAAGC TTTCGACCGC CGCTCGGCGG CTGGTACTGG GCCGGCCGTT CCGCAGCGAC
AAGCTGTCGC ACACTCTGCT GCCCAAGCGG ATAGCGCTGC CGGTCTTCGC CTCCGACGCG
CTGTCGTCCA CGGCGTATGC ACCCGAGGAG ATCTTCCTCG TGCTGTCGGT GGCCGGTCTG
GCGTCCTATT CGATGGCGCC GTGGATCGGT CTGGCGGTCG CCGCGGTGAT GCTGATCGTG
ATCGCCAGTT ACCGGCAGAA CGTGCACGCC TACCCGTCGG GTGGCGGCGA CTACGAGATC
GCCACCACCA ACCTCGGCCC CACCGCCGGG CTCACGGTGG CCAGCGCGCT GCTCGTCGAC
TACGTGCTGA CCGTGGCGGT GTCGATGTCC TCGGCGATGG CCAACATCGG CTCGGCGGTG
CCGTTCATCA ACCAGCACAA GGTGTGGTTC GCCGTGGCGG CGATCCTGGT CCTGGCGGCG
TTGAATCTGC GCGGAATCCG GGAGTCGGGA ACCGCGTTCG CGATTCCGAC CTACGCGTTC
ATCGTCGGCA TGAGCGTGAT GCTGATCTGG GGCTTCGTGC AGATCTATGT GCTCGGAACG
CCGTTGCGGG CCGAATCGGC GGACTTCGAG ATGCACTCCG AGCACGGCGA TGTCCTGGGG
TTCGCGTTGA TCTTCCTTGT GGCGCGGGCA TTTTCGTCGG GCAGTGCCGC GCTGACCGGT
GTCGAGGCGA TCAGCAACGG GGTGCCGGCG TTCCGGAAAC CCAAGTCCCG CAACGCCGCC
ACCACCCTGC TGCTGCTCGG GCTGATCGCG ACAACCCTGT TGATGGGCAT CATCATGCTC
GCCCGCGCGA TCGGCGTGCA GATCGCCGAA CGGCCCGCAG AACAGCTGGT CGGCGCGCCC
GAGGATTATC ACCAGAAGAC CCTGATCGCC CAACTGGCCG AGACGGTCTT CCACGGCTTC
CCGTTCGGCC TGTTCTTCAT CGCCCTGGTC ACCGCGCTGA TCCTGGTGCT GGCCGCCAAC
ACCGCCTTCA ACGGGTTCCC CGTGCTGGGA TCGATTCTGG CCCAGGACCG TTTCCTGCCG
AGGCAGCTGC ACACCCGCGG CGATCGACTG GCATTCTCGA ACGGCATCCT GTTCCTGGCA
TTCGGCGCCG TCGCGTTCGT GGTGGCGTTC CAGGCTGAGG TGACCAAGCT CATCCAGCTC
TACATCGTGG GCGTGTTCGT GTCGTTCACG CTGAGCCAGA TCGGCATGGT CCGGCACTGG
ACACGGCTGT TGCGGACCGA GACCGACGCC GCCGCCCGCG GGCGGATGGT GCGCGCGCGC
GTGATCAACA CGGTCGGCTT CCTGTGCACC GGAACCGTTC TGATCATCGT CGTGGTGACC
AAGTTCGTCG TCGGGGCGTG GATCGCGATC CTGGCGATGG GCGCGCTGTT CGGGATCATG
AAGCTGATCC ACCGCCACTA TGCCTCGGTG AGCCGTGAGC TCGAGGCGCG GGCCGCCGAC
GCCGAGGACA TCGTGCTGCC CAGCCGCAAT CACGCGGTCG TGCTGGTGTC GAATCTGCAC
ATGCCGACGC TGCGTGCGCT GGCCTACGCG CGCGCCACCC GGCCCGACGT GCTGGAGGCG
ATCACCGTCA GCGTGGACGA CGCGGAAACC CGCGAGCTGG TGCACAAGTG GGAGAACAGC
GACGTCAGCG TCCCGCTGAA GGTGATCGCC TCGCCGTACC GGGAGATCAC CCGTCCGGTG
CTCGACTACG TCAAGCGGGT CACCAAGGAC TCGCCGCGCA CCGTGGTGAC CGTGTTCATC
CCGGAGTACG TCGTCGGTCA CTGGTGGGAA CAGGTGTTGC ACAACCAGAG TGCGTTGCGA
CTGAAGGGCC GGCTGCTGTT CGAACCCAAC GTGATGGTGA CCTCGGTGCC GTGGCAGCTG
ACATCGTCGG AGCGTCTCAA GAAGATGGCG CCGCAGTCCG CGCCGGGCGA CGCACGCAGA
GGATTCCTCG AATGA
|
|---|
| Protein sequence | MSKLSTAARR LVLGRPFRSD KLSHTLLPKR IALPVFASDA LSSTAYAPEE IFLVLSVAGL
ASYSMAPWIG LAVAAVMLIV IASYRQNVHA YPSGGGDYEI ATTNLGPTAG LTVASALLVD
YVLTVAVSMS SAMANIGSAV PFINQHKVWF AVAAILVLAA LNLRGIRESG TAFAIPTYAF
IVGMSVMLIW GFVQIYVLGT PLRAESADFE MHSEHGDVLG FALIFLVARA FSSGSAALTG
VEAISNGVPA FRKPKSRNAA TTLLLLGLIA TTLLMGIIML ARAIGVQIAE RPAEQLVGAP
EDYHQKTLIA QLAETVFHGF PFGLFFIALV TALILVLAAN TAFNGFPVLG SILAQDRFLP
RQLHTRGDRL AFSNGILFLA FGAVAFVVAF QAEVTKLIQL YIVGVFVSFT LSQIGMVRHW
TRLLRTETDA AARGRMVRAR VINTVGFLCT GTVLIIVVVT KFVVGAWIAI LAMGALFGIM
KLIHRHYASV SRELEARAAD AEDIVLPSRN HAVVLVSNLH MPTLRALAYA RATRPDVLEA
ITVSVDDAET RELVHKWENS DVSVPLKVIA SPYREITRPV LDYVKRVTKD SPRTVVTVFI
PEYVVGHWWE QVLHNQSALR LKGRLLFEPN VMVTSVPWQL TSSERLKKMA PQSAPGDARR
GFLE
|
|---|
| |