Gene Mflv_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3509 
Symbol 
ID4974827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3736342 
End bp3737148 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content71% 
IMG OID640457730 
Producthemolysin A 
Protein accessionYP_001134771 
Protein GI145224093 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0906767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGTC GCGCGCGTGT GGACGCCGAA CTGGTCCGGC GGGGTCTTGC CCGCTCGCGC 
CAGCAGGCTG CCGAGCTGAT CAGTGCCGGC AAGGTCCGCG TCGACGGGAT GCCCGCCGCC
AAACCCGCGA CCGCGGTGTC GGTGACGGCC AATCTGAGTG TCGAGGCCGG TGACGAGGAT
TCCTGGGTGT CGCGGGGCGC GCACAAGCTC ATCGGCGCCC TCGATGTGTT CGGACTGACC
GTCGCAGGCC GGCGCTGCCT GGACGCGGGT GCCTCGACCG GAGGGTTCAC CGAGGTTCTG
CTGAGTCGGG ACGTCCGCGA AGTCGTCGCC GTCGATGTCG GTTACGGCCA GTTGGCGTGG
AGCGTTCGCA CCGACCCGCG GGTGACCGTC ATGGAGCGCA CCAACGTCCG CGACCTCACC
GCGGAGGCGA TCGGGGGTCC GGTCGATCTC GTCGTCGCCG ACCTGTCGTT CATTTCGCTG
GCGACGGTGC TGCCTGCACT GGCCGCATGC GCGTCGCCCG GCGCCGATAT CGTTCCCATG
GTGAAACCGC AGTTCGAGGT CGGCAAGGAT CGGGTGGGTG CCGGCGGGGT GGTGTCGGAC
CCGCAGTTGC GCGTCGACGC GGTGCTCTCG GTCGCCCGGC GTGCCGCGAG CCTGAACTGG
CACGCTGTGG CGGTGACCGC CAGCCCGCTG CCCGGTCCGG CGGGCAACGT GGAGTACTTC
CTCCATCTGC GCGCCCGGGC CGACGCCATG TCGCAGGACG CGCTGGAAGG CGCCGTCCGG
CGCGCCGTCG ACGAAGGGCC TCAATGA
 
Protein sequence
MTRRARVDAE LVRRGLARSR QQAAELISAG KVRVDGMPAA KPATAVSVTA NLSVEAGDED 
SWVSRGAHKL IGALDVFGLT VAGRRCLDAG ASTGGFTEVL LSRDVREVVA VDVGYGQLAW
SVRTDPRVTV MERTNVRDLT AEAIGGPVDL VVADLSFISL ATVLPALAAC ASPGADIVPM
VKPQFEVGKD RVGAGGVVSD PQLRVDAVLS VARRAASLNW HAVAVTASPL PGPAGNVEYF
LHLRARADAM SQDALEGAVR RAVDEGPQ