| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2405 |
|---|
| Symbol | |
|---|
| ID | 4973726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 2505293 |
|---|
| End bp | 2506108 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640456618 |
|---|
| Product | 3-alpha-hydroxysteroid dehydrogenase |
|---|
| Protein accession | YP_001133670 |
|---|
| Protein GI | 145222992 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTACG ACGGCAGGCA CGTCGTCGTG ACAGGCTGCG CGTCGGGTAT CGGAGCGCAG
GCCGCACGCC TTCTGCGCGA CCTCGGGGCC CGGGTGACCG GCCTGGATGT CCGCGCACCG
GAGGATGTTT CGGCGCTCAC CGACTTCATC TCTGTCGACC TTGCCGACCA GGACTCGGTG
CGGGCGGCCG CTGCGGCCGT CGACGGCGCG GTCGACGCGC TGTTCAACGT GGCCGGGGTG
TCCTCGGGGA TCGGTGATCC ACTGCTGGTC CTGCGCATCA ATTTCCTGGG CATGCGGCAG
TTCACCGAAT CCCTTCTCGA CAGGATGCCG GCGGGCGGCG CGGTCACCAA CGTGTCGTCG
CTGGCGGCGT CGGCGTACCG GGAGAACGCG CACGTCACCG CAGGCCTGCT CGCCACCCGA
TCGGTGGACG AGGGGCTGCG GTGGTGTGCT GATCATCCCG AGGCGCTGGC GGACGGCGGG
TACCGCCAGT CGAAGGAGGC GATCATTCTG TACGGCATGC AGCGTGTGAC CGACCTGGGC
GCGCGCGGCA TCCGTGTCAA CTGCACCGCA CCGGGCGTCA CCGAGACACC GATCCTCGAC
CAGTTGCGGT CGGCGTACGG CCAGCAGTAC CTCGACTCGT TCACCGCACC GCTGGGACGG
GTGTCGACGC CCGAGGAGCA GGCCGCCGTT CTGGTCTTCC TCGGTAGCCG GGCAGCCGGC
TACATCTCGG GTCAGGTGCT GTGGACCGAC GGCGGGATAC TCGGCCGGCG CATCGCCTCG
CAGATGTTCG ACGAACCCCT GACACAAGGG AATTGA
|
|---|
| Protein sequence | MRYDGRHVVV TGCASGIGAQ AARLLRDLGA RVTGLDVRAP EDVSALTDFI SVDLADQDSV
RAAAAAVDGA VDALFNVAGV SSGIGDPLLV LRINFLGMRQ FTESLLDRMP AGGAVTNVSS
LAASAYRENA HVTAGLLATR SVDEGLRWCA DHPEALADGG YRQSKEAIIL YGMQRVTDLG
ARGIRVNCTA PGVTETPILD QLRSAYGQQY LDSFTAPLGR VSTPEEQAAV LVFLGSRAAG
YISGQVLWTD GGILGRRIAS QMFDEPLTQG N
|
|---|
| |