Gene Mflv_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2333 
Symbol 
ID4973655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2430960 
End bp2433299 
Gene Length2340 bp 
Protein Length779 aa 
Translation table11 
GC content70% 
IMG OID640456546 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001133599 
Protein GI145222921 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.571725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACG ATCCCCCGCT GGCGGGCATG CAGATCCTCG ACGCCTCCAC CGGTCCGATG 
ACCGCGGTCG GGCGCCTGTT CGCCGACCTG GGTGCCGAGG TCACCGTGGT GCGGTTGCAG
GGCGTCACCG ACGACGCGAC GGTGGGCCCG TACGTCGACG ACGTGGCGAT CGGTACCGCG
ATCAACCGTC ACGGCATGCC CGAGGTCGAG GTCGATCCGT CGAATCCGGA GGGCCGGGCG
CGGTTCACCG AGATGCTCGC GGACGCCGAC ATCCTCATCG AGAGCACCCG GCCCGGTTCG
CGGGCCGAGG CGGTGCTGGC GGTTCGCGCG CTTCGCGCCG AGCACCCCGA CCTGGTGATC
CTGTCGATCA GCGACTTCGG CCGGGATTCG GAGTTCCGCA CATGGCAGGC GACCGGCCCT
GTGCTGCACG CACTTTCGAG TGAGCTGTCG CGGTCGGGCA TCCCCGGTCG CGAACCCCTC
GTTCCGCCGG CAGATCTGCC GTACCAGGTC GCCGCCGCGC AGGCCGCCGT GATGACGCTG
AGTGTGTTCC TGGACCGGTT GCGCACCGGC GAGGGCGACC TGATCGACTT CTCCGTCCTC
GACGGCGCGA TGCAGGCCCT CGATCCGCCG TTCGGATCGG CGGGCAGCGC GTCGGCCGGT
GTGGCGGTCA GCGCCCAGCA GCGCGACTGG AACGCCGAGA AGCAGCGCTA CCCGATCATC
GCCTGCAAGG ACGGGCATGT GCGCATCTGC ATCCTGTCCA AGCGTCAGTG GCACGGGATG
TTCGCGTTGA TGGGAAGTCC CGAGGAGTTC GCCGATCCGT CCTACGACAA ACTCGGCAAG
CGGTTCCACT CGCCACATCT CCTCGAGGCC ATCGAGCGCT TCTGCGCCGA CAAGACACGG
GCCGACCTGG AGGCCCGGTG CCAGGCACAC GGGGTGCCCG CGGCGGCCGT GCTCACGCTC
TCCGAAGCAC TCAACGCCGA ACACTTCACC GCCCGCGGGT TCTTCCACGA CGCCGAACTG
GCGCCCGGTT TGGTGGCACC GATGCCCGCG GGGGTCAGCG AGATCGACGG TCACCGGGCC
AGCGCGCAGA ACTCGCCGAC GACGCGGTCA CCACGTCCGG CGGAAGCGCC GCTGCTCGCG
AGCCGACCCC GCCGGGGCCA GGGACTGCCG TTGGAGGGCA TCCGTGTCCT GGATCTCGGG
GTGATCGTCG TCGGAGCAGA CACCGCAAGG CTTTTCGGTG ATCTCGGCGC CGATGTGGTC
AAGATCGAGC ATTCCGCGCA CATGGACGGG CTGCGGATCG GGCGGCCCAC GGCGATGACG
CAGCCGTTCG CCGCAGGCCA CCGCAACAAG CGCTCGATCG GGATCGACCT GCGCGTCGAA
GAGGGCCGGG AACTCGCGCA CCGTCTGGTG GCGCAGTCCG ACGTCGTCCT GACCAACTAC
AAGCCCGGCG TCGCCGAGGC GCTCGGGATG GACTATGCGA CGTTGCACCG GATCAACCCG
GACATCGTCG TGGTCGACAG CTCCGCGTTC GGCCCGACGG GCCCCTGGGC CAAGCGGCTC
GGCTACGGCC CTCTGGTGCG CGCCGCAGTA GGCTTCACCA ACCTGTGGAC CTACCCGGGC
GAGCCGGACA CGTTCTGCGA CACCGTCACC GTCTACCCCG ATCACGTGGC GGCGCGGATC
GGGACGCTGT CCGCACTGGC CCTGCTGCTG CGCCGCGAGC GCGCCGGCGA GGGCGGCTCG
GCGAGCATCT CCCAGGCGGA GGTCATGCTC AGCCACCTCG CCGCCGACAT CGCCGCGGAT
GCTCTGCAGC GTGGCGGCCA CACGAGCACC GCAACCACCC CGGACGCACC GTGGGGCCTG
TATCGCACCG AGGGAGACGA CCACTGGGTC GCGATCACGG TGCGCGACGA CGCCGACCGC
AGCGCCCTGG CCGGTGTGGT GGGCCATTCC GCGGGGCAGC CGACCTCGCT GGACGACGCG
GTCCGCGTCT GGGCGGCTCA ACGGTCGCAC ATGGACGCGA TGACCGAGCT GCAGTCCGCC
GGGGTGCCCG CCGGTGCGGT TCTGCACGCC CATGAGGTGC CGGGTTGGGC GTACTACGAG
CAGCGCCGCA CGTTCCGGGA GGAACTGCAC CCGCACGCGA GCGAGCCGTT CATGATGGAG
AACGTCCAGA TCCACTGCGA CCATGTGCCG GACCCGCCCC TGGGACAGGC GCCGCTGCTG
GGCGAGCAGA CCGCCGACAT CGCCGCGGAG CTCCTCGGTC TCGACGCTGC CGACATCGCT
TCCCTGCTGG AACGCGGCGT GCTGGAGAAC CCCGCGCGGG AGGCCGCCGC CTCGATGTGA
 
Protein sequence
MSYDPPLAGM QILDASTGPM TAVGRLFADL GAEVTVVRLQ GVTDDATVGP YVDDVAIGTA 
INRHGMPEVE VDPSNPEGRA RFTEMLADAD ILIESTRPGS RAEAVLAVRA LRAEHPDLVI
LSISDFGRDS EFRTWQATGP VLHALSSELS RSGIPGREPL VPPADLPYQV AAAQAAVMTL
SVFLDRLRTG EGDLIDFSVL DGAMQALDPP FGSAGSASAG VAVSAQQRDW NAEKQRYPII
ACKDGHVRIC ILSKRQWHGM FALMGSPEEF ADPSYDKLGK RFHSPHLLEA IERFCADKTR
ADLEARCQAH GVPAAAVLTL SEALNAEHFT ARGFFHDAEL APGLVAPMPA GVSEIDGHRA
SAQNSPTTRS PRPAEAPLLA SRPRRGQGLP LEGIRVLDLG VIVVGADTAR LFGDLGADVV
KIEHSAHMDG LRIGRPTAMT QPFAAGHRNK RSIGIDLRVE EGRELAHRLV AQSDVVLTNY
KPGVAEALGM DYATLHRINP DIVVVDSSAF GPTGPWAKRL GYGPLVRAAV GFTNLWTYPG
EPDTFCDTVT VYPDHVAARI GTLSALALLL RRERAGEGGS ASISQAEVML SHLAADIAAD
ALQRGGHTST ATTPDAPWGL YRTEGDDHWV AITVRDDADR SALAGVVGHS AGQPTSLDDA
VRVWAAQRSH MDAMTELQSA GVPAGAVLHA HEVPGWAYYE QRRTFREELH PHASEPFMME
NVQIHCDHVP DPPLGQAPLL GEQTADIAAE LLGLDAADIA SLLERGVLEN PAREAAASM