| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2196 |
|---|
| Symbol | |
|---|
| ID | 4973518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 2274437 |
|---|
| End bp | 2276062 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640456405 |
|---|
| Product | putative ABC transporter membrane-spanning protein |
|---|
| Protein accession | YP_001133462 |
|---|
| Protein GI | 145222784 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3559] Putative exporter of polyketide antibiotics |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCG CCGGCCATCT CACCCACACC CGGCACGCCG CGCCGTCCGC GCCGTCCAAG
TCGATGTGGA CGCACACCGG GCTGCTGATC CGACTTGCGC TGCGACGCGA CCGGATTCGG
CTGTCGATAT GGATCGCCAT GCTGAGTCTG CTGATGATCT ACACCCCCAA CGCGCTGGAA
CTGGCGTACC CCGAGGAGGC CCAGCGGCTC GCACGGGTCA ACCTGCTCAA GACACCCGCC
GGAATGATGA TGGGCGGGCC CGTGTTCGGC GTCGACGAAA CCGATCTGGG CGTGATGATG
GCCAACGAGC TGATGCTCAC CCTGATCGTC GCCACCTCGA TCCTCGCCAT TCTGACGGTG
ATTCGGCACA CCCGCGCCGA GGAGGAGAGC GGCACTGCCG AGCTCGTCCT CGCCTCGGTC
GTCGGCCGGT ACGCGCGCAC CACCGCCGCC CTGAGTGTGG CTGCCGGGGT CAATGTGGTC
CTCACCGTCA CGATGACGGC TGCGATGGTC GCGAGTGGAT TCGGCGTCTC GGATTCGCTG
GGGATGTGTG CCGGGGTGAC CGCCGTGGCG ATGGTGTTCG CCGCGGTGGC TGCAGTCACG
GCCCAGATGT GGCGTGCCGC AAGGGCTGCC ACGGGTACGG CCATGGCGGC GTTGGCGCTC
GCGGCGCTGA TCCGCGGCAT CGGCGATGTG ATCGACAACT CGGGCAGCGC GCTGAGCTGG
TTCTCCCCCA TCGCCTGGGC ACAGCAGATG CGGTCGTTCG TCGACCTTCG CTGGTGGCCT
CTGGCGCTGC TGATCGGACT CACCCTCGCC CTCGTCACGC TGGCCGCCGC CCTGGAGCGA
CGCCGCGAGT ACGACGACGC GACGCTCTCG TCCCGCGGTG AACACCCCGG CGCGAGACCT
GTCCGAGGCG TCCTCGCCCT GCATCTCGTC CTGCAGCGCG GCCAGACCAT CGGCTGGTCG
GCCGGACTCT TCATCGCGGG GCTCGCCTTC GGGTCGATGA CGAAGTCGCT GCTCGACGCC
GCCGAAGGCA ATGAGCTGAT CGCACAGATG ATCTCGGCCC AGGGCACCGA CGGTGTGTAC
ATGACGATGT CGCAGTTCCT GGCCGCCGCG GCCTCGGCGT ATGTCGTGGC CTGCGTCCTG
CGGCTGCACG CCGACGAGAG GTCCGGCCTC GGGGAGTCGG TGCTCGCCGG TGCGGTGTCC
CGGTGGCGCT GGCTGTCGAC GAGCGTCGTT GCGGCGGTGC TCGGGGCGAC GGTGTTGATG
TTCTTCGCCG GCCTGGGCAA CGGCGTGGGC GCCGGGATCA CCCTCGGCGA GCCCGGGACG
GTCGGCAGAC TCACGGTGGC GGGCCTCGCG TTCGTTCCCG CCTTGGCGGT GATGGCGGGG
GTCGCCGCGG TCGGTGTCGC GCTGCGCCAG CCCTGGATCG GTTGGCTCGC AGTCGCTTCA
GTGGTTCTGT CGCTCTACCT CGGCGCGCTG CTGCGCCTGC CGCGGTGGCT GATCGACCTG
TCGCCCGTCA GCCGCACAAC GGTGCCGACC GATGTCCCGG TCGTCGCGCT GGTCGTCATG
TGCGTGGCGG CGGCCACCCT GACCGTGCTC GCGGGATTTC TGTACCGCAG ACGCGACGCG
GCGTGA
|
|---|
| Protein sequence | MTTAGHLTHT RHAAPSAPSK SMWTHTGLLI RLALRRDRIR LSIWIAMLSL LMIYTPNALE
LAYPEEAQRL ARVNLLKTPA GMMMGGPVFG VDETDLGVMM ANELMLTLIV ATSILAILTV
IRHTRAEEES GTAELVLASV VGRYARTTAA LSVAAGVNVV LTVTMTAAMV ASGFGVSDSL
GMCAGVTAVA MVFAAVAAVT AQMWRAARAA TGTAMAALAL AALIRGIGDV IDNSGSALSW
FSPIAWAQQM RSFVDLRWWP LALLIGLTLA LVTLAAALER RREYDDATLS SRGEHPGARP
VRGVLALHLV LQRGQTIGWS AGLFIAGLAF GSMTKSLLDA AEGNELIAQM ISAQGTDGVY
MTMSQFLAAA ASAYVVACVL RLHADERSGL GESVLAGAVS RWRWLSTSVV AAVLGATVLM
FFAGLGNGVG AGITLGEPGT VGRLTVAGLA FVPALAVMAG VAAVGVALRQ PWIGWLAVAS
VVLSLYLGAL LRLPRWLIDL SPVSRTTVPT DVPVVALVVM CVAAATLTVL AGFLYRRRDA
A
|
|---|
| |