Gene Mflv_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2177 
Symbol 
ID4973499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2254516 
End bp2255139 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content69% 
IMG OID640456386 
Productpeptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin 
Protein accessionYP_001133443 
Protein GI145222765 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.148812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0743485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCCCC GCACCCCGCC GCGCAGCATG GCGCGCACGA TCGCCGCGAT CGGTTCGGCC 
ACAGTGCTGG CGGGCTGCGG TCACGCACCC GAGGTCATGC TCGTCCAGAC CAGCATCACG
GTGCCGCCCG CCCCGGTTCC GGTGGCCCCG CCCGCCGACA CGTTGAGCAT CGGCACGGGC
GCGGTGGACA CCACCGGCGG CTGGCTCCCC GACGGTCGTC CGCTCTCCCC GTTCGAATCG
GCGAATCCCA TTCTGTCGCA AATGGATCCA GCGCTGCTGG CCGCGGTTCA GAATGCCGCC
CGCGCCGCGC AGGCCAGTGG TATCAATATG ACGGTGACCT CAGGCTGGCG CTCGAAAGGC
TTTCAGCAGA GGCTGTTCGA CGATGCGGTC GTCGCATACG GCAGTGTCGC CGCGGCCGCC
GAATTCGTCG CGACACCCGA GGTGTCCAAA CACGTCACGG GGCAGGCGGT CGACATCGGC
CCGCCCGATG CGGACCACTG GCTGATCGCC AACGGCCGGC AGTTCGGCCT GTGCCAGATC
TATGCCAACG AGATCTGGCA CTTCGAGCTC ACGGCCGACG CGCAGGGGGA GTGCGCGCCG
CTCAAACCCA ACGCCGCGGG ATAG
 
Protein sequence
MTPRTPPRSM ARTIAAIGSA TVLAGCGHAP EVMLVQTSIT VPPAPVPVAP PADTLSIGTG 
AVDTTGGWLP DGRPLSPFES ANPILSQMDP ALLAAVQNAA RAAQASGINM TVTSGWRSKG
FQQRLFDDAV VAYGSVAAAA EFVATPEVSK HVTGQAVDIG PPDADHWLIA NGRQFGLCQI
YANEIWHFEL TADAQGECAP LKPNAAG