Gene Mflv_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1385 
Symbol 
ID4972711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1441236 
End bp1442021 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content75% 
IMG OID640455588 
Producttype II secretion system protein 
Protein accessionYP_001132655 
Protein GI145221977 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0556186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.324397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG CGGCGCTGGC CCTCGCGGTG GCGGTGCTGA CCGCGCCGAC GGATGCTCGC 
CTGCGGGCAC CGGTGCTGCG CAGGACGTCG ACACCGCGAC GGCGGCTGCC CGGACAGCTG
CCGGCTGCGA TCGCGTGCCT GACGGTCGCT GCCGTGCACA CGCCGACGAC GGCGGCGGCG
CTGGGCCTGT TGCTCGCGAC GCTGAGCGCC CGCCGGCGGG TGACCCGAGC GCACCGCCGC
CGCACCGCCG AGGCCGCCGC GCTGCAGGAC GCTCTCGACG TCCTCGTCGG CGAGCTGCGT
GTCGGTGCGC ATCCGGTCGC GGCGATCACC GTCGCCGGTC ATGAGGCTCG CGGCCGCATC
GCCGAGTCGC TCAACGCTGT CGCGGCGCGG GCCCTGCTCG GGGCCGACGT CCCCGCCGGT
CTGCGCGCCG AGGGGCGGAG GTCGCCCTCG CCGGGACACT GGGACCGGCT CGCCGTGTGT
TGGCAGCTGG CGCAGACGCA CGGCCTCGCG ATCGCCGCGC TGATGCGGGC GGCCCAACGC
GACATCACCG AGCGTGAACG CTTCCGCGGC CGCGTGGAAT CCGGGATGGC GGGTGCGCGC
GCGACGGCGG TGATCCTGGC GGGGCTGCCG GTGCTCGGCG TCCTGCTCGG CCATGCGATC
GGGGCCGAGC CGCTGGCTTT CCTGCTGTCC GGCGGAGCGG GCGGGTGGTT GTTGCTCGTG
GGCACCGTGT TCGTCTGCGC CGGCCTCCTG TGGTCGGACC GGATCACCGT ACAGGTGTTG
ACATGA
 
Protein sequence
MTLAALALAV AVLTAPTDAR LRAPVLRRTS TPRRRLPGQL PAAIACLTVA AVHTPTTAAA 
LGLLLATLSA RRRVTRAHRR RTAEAAALQD ALDVLVGELR VGAHPVAAIT VAGHEARGRI
AESLNAVAAR ALLGADVPAG LRAEGRRSPS PGHWDRLAVC WQLAQTHGLA IAALMRAAQR
DITERERFRG RVESGMAGAR ATAVILAGLP VLGVLLGHAI GAEPLAFLLS GGAGGWLLLV
GTVFVCAGLL WSDRITVQVL T