Gene Mflv_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1082 
Symbol 
ID4972408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1127981 
End bp1128760 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID640455278 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001132352 
Protein GI145221674 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.268957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.510338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACG TGATGAGGCT TGTCCGGGGC TGCCTGTGGG TGATGTTCGG ATTGTTCTTC 
CTGTTCCCGC TCTACGCGAT GGCCGACTTC TCCACCCGCA ACCTGATCTC CGACGGCCGC
ACCTGGCAGG CCTGGGCCAA CCTGGTCACC GACGACGCGC TGTACCGCTC GATCGTGGTG
TCGCTGCTGC TCGCGGTGCT GACCGTGGTT GCGATGCTGG TGCTGCTGGT GCCGACCATG
ATCTGGGTGC GGTTGCGCGC ACCGTGGGCG AAGGGTCTGG TCGAGTTTCT GTGCCTGCTG
CCCTTGACGA TTCCTGCGCT GGTGATCGTC GTCGGGCTGC GCAACGTCTA CCTCTGGGTG
GTCTATTTCC TCGGCGAATC CGCGCTGACG CTGACGTTCG TGTACGTCAT CGTCGTGCTG
CCGTTCGCCT ACCGCGCGAT CGACGCGGCG CTCTCGGCGA TCGACCTGCA GACGTTGTCG
GAGGCCGCGC GCTCGCTGGG GGCGGGCTGG TTCACCACCA TCACCCGCGT GGTGGTGCCC
AACATCTGGT CGGGCATCCT GTCGGCCGCG TTCATCTCCA TCGCTGTCGT GCTCGGCGAG
TACACCATCG CGTCGCTGTC GGGTTACGAG ACGCTGCAGG TGCAGATCGT GCTGATCGGC
AAGAGCGACG GCCCGACGTC GGTGGCGGCC TCGCTGGCGA CGCTGCTGTT CGGTTTCGCG
CTGCTGCTGA TCCTGTCGTT GGTGACCAGG GGAAGACGCA ACGTGGGAGT GACGACATGA
 
Protein sequence
MADVMRLVRG CLWVMFGLFF LFPLYAMADF STRNLISDGR TWQAWANLVT DDALYRSIVV 
SLLLAVLTVV AMLVLLVPTM IWVRLRAPWA KGLVEFLCLL PLTIPALVIV VGLRNVYLWV
VYFLGESALT LTFVYVIVVL PFAYRAIDAA LSAIDLQTLS EAARSLGAGW FTTITRVVVP
NIWSGILSAA FISIAVVLGE YTIASLSGYE TLQVQIVLIG KSDGPTSVAA SLATLLFGFA
LLLILSLVTR GRRNVGVTT