Gene Mfla_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_2139 
Symbol 
ID3999948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp2286543 
End bp2287784 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content56% 
IMG OID637939065 
Productisocitrate dehydrogenase (NADP) 
Protein accessionYP_546247 
Protein GI91776491 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000111217 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACAA AAATCAAAGT ACCCACTACT GGCGAGAAAA TCAGCGTTAA TGCGGACAAC 
TCGCTCAATG TGCCCGATCA CCCGATTATC CCATTTATCG AAGGCGACGG TATCGGCGTC
GATATCACCC CACCCATGCG CCATGTCGTC GACAGCGCCG TCGCCAAGGC CTATGGCGGC
AAACGCGCCA TTGCCTGGAT GGAGGTATAT GCCGGCGAAA AAGCCGTGAA GACCTATGGT
GACAACACCT GGCTACCCGA TGAAACACTC AAGGCCGTCA AAGATTATGT CATTTCCATC
AAGGGACCGC TGACCACTCC CGTAGGCGGT GGCATCCGCT CGCTCAACGT GACCTTGCGC
CAGGAACTCG ACCTGTATGT CTGCCTGCGT CCGATCCAGT ATTTTCAAGG CGTGCCCAGC
CCGGTCAAGC ATCCTGAAAA AACCAACATG GTGATTTTCC GCGAGAATAC CGAGGACATC
TATGCCGGTA TCGAATGGGC TGCCGGTACC GACGAGGTGA AAAAGGTGGT GGACTTCCTC
AGTGACATGG GTGTGCGCAA GAAGATACGC TTCCCAGAAG CTTCCGCCAT CGGCATCAAG
CCGGTGTCAA TCGACGGCAG CAAGCGCCTG GTGCGCAAGG CGATCCAGTA CGCCATCGAC
AACAACCGCA AGTCCGTAAC CATTGCCCAC AAGGGCAACA TCATGAAGTT CACCGAAGGC
GGATTTAAGA CTTGGGGTTA CGAAGTCGCC AAGGAAGAGT TCGGTGCAGT GGAAATTGAC
GGCGGGCCGT GGTGCAAGCT GCCCAATGGC ATCATCATCA AGGACTGCAT CGCCGATGCC
TTCCTGCAGG AAATCCTGCT GCACCCTGCA GACTACGACG TAGTGGCCAC CCTAAACCTG
AACGGCGACT ATATCTCAGA TGCGCTCGCA GCCCAGGTAG GTGGTATCGG CATTGCGCCC
GGTGCCAATA TCTCGGATAC CGTGGCCATG TTCGAGGCCA CCCACGGTAC GGCTCCCAAG
ATCGCGGGCA AGGATATCGC CAATCCAAGT TCGCTGATCC TGTCAGCCGA GATGATGTTG
CGCCACCTGG GATGGACTGA GGCCGCCGAC CTGGTCATTA ACGGTGTGGC CAAGGCGATC
CAGGCAAAGC GTGTTACCCA TGACTTCTCA TCACAAATGG AAGGCGCCAC GCAAGTCGGC
AGTGCAGAAT TCGGTGCGGA GATCGTCAAG CACATGTCAT GA
 
Protein sequence
MSTKIKVPTT GEKISVNADN SLNVPDHPII PFIEGDGIGV DITPPMRHVV DSAVAKAYGG 
KRAIAWMEVY AGEKAVKTYG DNTWLPDETL KAVKDYVISI KGPLTTPVGG GIRSLNVTLR
QELDLYVCLR PIQYFQGVPS PVKHPEKTNM VIFRENTEDI YAGIEWAAGT DEVKKVVDFL
SDMGVRKKIR FPEASAIGIK PVSIDGSKRL VRKAIQYAID NNRKSVTIAH KGNIMKFTEG
GFKTWGYEVA KEEFGAVEID GGPWCKLPNG IIIKDCIADA FLQEILLHPA DYDVVATLNL
NGDYISDALA AQVGGIGIAP GANISDTVAM FEATHGTAPK IAGKDIANPS SLILSAEMML
RHLGWTEAAD LVINGVAKAI QAKRVTHDFS SQMEGATQVG SAEFGAEIVK HMS