| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1748 |
|---|
| Symbol | |
|---|
| ID | 4001170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 1875543 |
|---|
| End bp | 1878947 |
|---|
| Gene Length | 3405 bp |
|---|
| Protein Length | 1134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637938662 |
|---|
| Product | transcription-repair coupling factor |
|---|
| Protein accession | YP_545857 |
|---|
| Protein GI | 91776101 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
|---|
| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.921754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.10168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTTT CCCTGCCCAT TCCGGCACCC GGCCAAACGA GCCGGATCAA TCCCCTGACG
CCCGGCACCG ATAGCCTGGC ACTCGCACAA CTCGCCACCC ACCGTGCAGA GACTTCTGCC
AAGGCGCCTA TCGTTGTGGT CACCTCCAAC GCTTTCGATG CACAACGCCT ACTGGAAGAA
ATTCCCTGGT ATGCGCCGCA GCTACGCGTG CACCTGCTGC CGGACTGGGA AACCTTGCCC
TACGACCACT TCTCGCCGCA CCCGGACCTG ATTTCCGAGC GGCTGGCAAC CCTGTACCAG
ATCAGCCAGA ACAGCTGCGA CATCGTGCTC GTGCCGATAT CGACAGCACT GTTGCGCTTA
CCGCCCAAGG CCTACCTGGC AGCCCATACT TTCATCTTGA AAAAGGGACA GACCCTGGAC
ATTGAGGCCT TGCGCAACCA ATGTGCCAAT GCCGGCTACC ACCATGTCAG CCAGGTCATG
GGTCCCGGGG AGTTCAGCGT GCGTGGCGGG CTGATCGACC TGTTCCCGAT GGGCAGCGCC
CTGCCTTATC GTCTGGACCT GTTCGATGAC GAGATCGAGA CTATCCGTAC GTTCGATGTC
GATACCCAGC GCAGCCTGTA TCCGGTTGCC GATATCCGCT TGCTGCCGGC CAAGGAATTT
CCACTGGATG AAGCCGGTAT CGCGCGCTTC CGCCAGAGTT TTCGTGAAAT GTTCGAGGGA
GATCCCTCGC GCAGCCGTAT TTACAAGGAT GTTTCCAAAG GCATCGCCAG TGGCGGTATC
GAATGGTATC TACCCCTGTT TTTCGAACAG ACCGCGACAC TGCTGGATTA TGTGCCTGCT
GACGCCCTGT TGTGCCTGCA CGGCAACCTC GACCTGGCAT CGCAGGCCTT CTGGCATGAT
GCGCAATCAC GTTACCGCCA GCTGGCGCAT GACCCCGAGC GCCCCATCCT CAAGCCAGAA
ACCTTGCTGA TCAAGGCTGA GGAGTTCTTC AGCCAAAGCC ACGCCTGGGC CAGGATGCAG
CTCAGCCTGG ATAATGACAG CAAGCTTCCG GCGCTGGAGG TAGAGCGCCG CTCGGAGCAG
CCCCTGCATA AACTGAAGGA CTACATCCGC CGCTTCAAGG GCCGCATCCT CATTGCCGCA
GAAAGCCTGG GACGCCGCGA AACCATGGCG CAGCTGTTTC ACGACCACGG CATCTCCTAT
GAAACCTCCG AGGACTGGCA ATCCTTCCAG GCAGGCACCG CTCCTGTCAT GCTCGGCATC
AGTCCCTTGC ATGGCGGTTT CAGGGTCGAC GACATCACCG TCATTACCGA AGCCGAGCTC
TACGCCAACA CTGTCCGCCA GCAGCGCCGC CGCGACAAGG AAAAGCAGCG CAATACGGAA
GGCATGCTCA AGGATCTCTC CGAGCTTCGC GAGCACGACC CGGTCGTGCA TGAACAGCAC
GGGGTAGGTC GCTACCGCGG CCTGGTCAAT ATCGACTTCG GCGAAGGCGA AACCGAATTC
CTGTTGCTCG AATACGCCGG TGACGACAAG CTCTACGTCC CGGTCTCACA GTTGTTCCTG
ATCTCGCGCT ACTCCGGCGG CCCGCCGGAA TCCGCGCCGT TGCACCGCCT GGGCAGCGGC
CATTGGGAAA AGGCCAAGAA GAAGGCCCTC AAGCAGGTAC GCGACACCGC TGCCGAACTG
CTCAACCTCT ACGCCCAGCG TGCGGCGCGC AAAGGCCATG CCTTCAAACT CGGCCTGCAT
GACTACGAGG CATTTGCCGA GGGGTTTCCC TTCGAGGAAA CCGCCGACCA GCTTGCCGCG
ATCGAAGCCG TCATCAGCGA CATGCAGTCC GGTCGTCCCA TGGACCGACT GGTCTGTGGT
GATGTCGGCT TCGGCAAGAC GGAAGTGGCC TTGCGCGCCG CCTTCGTCGC CGTCATGGGT
GGCAGGCAGG TAGCCGTGCT GGTGCCGACA ACGCTATTGG CGGAACAACA TTTCCACAAC
TTCAGCGACC GCTTTGCCGA CTGGCCGGTC AAGATCACCG AAATCTCCCG CTTCCGCACC
GCCAAGGAAC AGGCACAGGC ATTGAAGGGC CTGGAGGATG GCAGTATCGA TATCGTCATC
GGTACCCACC GCCTAATCCA GAAAGACGTC AAGTTCAAGA ACCTCGGCCT GGTCATTCTC
GATGAAGAAC ACCGCTTCGG CGTTCGCCAG AAGGAACAAC TCAAGGCCAT GCGCGCCGAG
GTGGATGTCC TGACGCTGAC CGCCACACCG ATCCCACGTA CATTGTCCAT GGCCATGGAA
GGCCTGCGCG AATTCTCGGT CATCGCCACG CCACCGCAGA AGCGGCTGGC GATCAAGACC
TTCGCCACCC ATTATTCCGA AGGCATCATT CGCGAGGCTG CCATGCGCGA GTTCAAGCGC
GGCGGACAAG TGTACTTCCT GCATAACGAA GTGGACACCA TCTTCGTCAT GAAGGAAAAG
CTGGAGAAAA TCCTGCCCGA GGCCCGCATC GGCATCGCCC ATGGACAGCT GCGCGAGCGC
GAGCTGGAAC ATGTGATGCG CGACTTCTAC CAGCAGCGCT TCAACCTGCT GCTGTGCACC
ACCATCATCG AGACCGGCAT CGACGTGCCA ACGGCCAATA CCATCATCAT GAACCGCGCC
GACATGTTCG GCCTGGCGCA GCTGCACCAA TTGCGCGGAC GCGTGGGACG CTCGCACCAC
CAGGCCTATG CCTACCTGCT GACCGACCCT GACCGCAATA TCACGCCGCA GGCGCAAAAA
CGCCTGGATG CGATCCAGCT GCTCGAAGAT CTGGGAGCGG GCTTCCATCT CGCCATGCAC
GACCTGGAAA TCCGTGGCGC AGGCGAACTG TTGGGCGACA GCCAAAGCGG GGAAATGCAG
GAAATCGGCT TCACCCTCTA CTCCGAGATG CTCAGCCACG CCGTCAAACA GCTCAAGGCA
GGCAAGGAGC CGGATCTTTC GGCCCCCCTC GGCGTCACCA CTGAAATCAA CCTTCATACG
CCTGCATTAT TGCCGAACGA TTATTGCCCC GACGTGCATG AGCGCCTGGT GCTCTACAAG
CGCCTAGCCA ACTGCAGCGA CGACGATGCG CTGGACGCCA TGCAGGAAGA GCTGATTGAC
CGCTTCGGGC TGTTGCCAGA ACAAGGCGAG GCCCTGATGG CCTGCCATCG CCTGCGCATT
GCCGCCAAGG CCCTGGGAAT CAATAAGATC GACGCCAGCG ACTCCGCGAT CCAGCTGCAT
TTTTCACCGA AAGCGGATCT CGATCCGACC AAGCTCATCG CGCTCCTGCA ACGTGACCGC
CGCTGCCGCA TGAACGGGCC GGACAAGCTC AGGGTTACGG TACAATATCC CGGCATTGCG
CAACGTGCCG ACTTTATCAA GAACCTGTTA AAGGAACTCG CCTGA
|
|---|
| Protein sequence | MQFSLPIPAP GQTSRINPLT PGTDSLALAQ LATHRAETSA KAPIVVVTSN AFDAQRLLEE
IPWYAPQLRV HLLPDWETLP YDHFSPHPDL ISERLATLYQ ISQNSCDIVL VPISTALLRL
PPKAYLAAHT FILKKGQTLD IEALRNQCAN AGYHHVSQVM GPGEFSVRGG LIDLFPMGSA
LPYRLDLFDD EIETIRTFDV DTQRSLYPVA DIRLLPAKEF PLDEAGIARF RQSFREMFEG
DPSRSRIYKD VSKGIASGGI EWYLPLFFEQ TATLLDYVPA DALLCLHGNL DLASQAFWHD
AQSRYRQLAH DPERPILKPE TLLIKAEEFF SQSHAWARMQ LSLDNDSKLP ALEVERRSEQ
PLHKLKDYIR RFKGRILIAA ESLGRRETMA QLFHDHGISY ETSEDWQSFQ AGTAPVMLGI
SPLHGGFRVD DITVITEAEL YANTVRQQRR RDKEKQRNTE GMLKDLSELR EHDPVVHEQH
GVGRYRGLVN IDFGEGETEF LLLEYAGDDK LYVPVSQLFL ISRYSGGPPE SAPLHRLGSG
HWEKAKKKAL KQVRDTAAEL LNLYAQRAAR KGHAFKLGLH DYEAFAEGFP FEETADQLAA
IEAVISDMQS GRPMDRLVCG DVGFGKTEVA LRAAFVAVMG GRQVAVLVPT TLLAEQHFHN
FSDRFADWPV KITEISRFRT AKEQAQALKG LEDGSIDIVI GTHRLIQKDV KFKNLGLVIL
DEEHRFGVRQ KEQLKAMRAE VDVLTLTATP IPRTLSMAME GLREFSVIAT PPQKRLAIKT
FATHYSEGII REAAMREFKR GGQVYFLHNE VDTIFVMKEK LEKILPEARI GIAHGQLRER
ELEHVMRDFY QQRFNLLLCT TIIETGIDVP TANTIIMNRA DMFGLAQLHQ LRGRVGRSHH
QAYAYLLTDP DRNITPQAQK RLDAIQLLED LGAGFHLAMH DLEIRGAGEL LGDSQSGEMQ
EIGFTLYSEM LSHAVKQLKA GKEPDLSAPL GVTTEINLHT PALLPNDYCP DVHERLVLYK
RLANCSDDDA LDAMQEELID RFGLLPEQGE ALMACHRLRI AAKALGINKI DASDSAIQLH
FSPKADLDPT KLIALLQRDR RCRMNGPDKL RVTVQYPGIA QRADFIKNLL KELA
|
|---|
| |