Gene Mfla_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1704 
SymbolleuD 
ID4001241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1824823 
End bp1825467 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content55% 
IMG OID637938618 
Productisopropylmalate isomerase small subunit 
Protein accessionYP_545813 
Protein GI91776057 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.045793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00210823 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGCAT TTACTCAATT AAATGGTTTG GTGGCTCCAC TGGATCGCGC CAATGTCGAT 
ACCGACGCCA TTATCCCCAA GCAGTTTCTG AAGTCGATCA AGCGCGCTGG TTTCGGCCCC
AACGCCTTCG ATGAATGGCG CTATCTGGAC CAGGGAGAGC CAGGCAAGGA TAACAGCAAG
CGGCCGCTGA ATCCTGATTT CCCGCTCAAC TTCCCGCGCT ACCAAGGCGC CAGCATCCTG
CTGACCAGGG AGAATTTTGG CTGCGGCTCC AGTCGTGAGC ATGCGCCCTG GGCGCTACTC
GATTACGGTT TTCGTGCCAT TATCGCGCCG AGTTTTGCCG ATATCTTCTT CAACAACTGT
TTCAAGAATG GCATCCTGCC GATTGTCCTT GATGCGGAAA TAGTCGATAG CCTGTTCAAA
GAAGTCGAGG CCAATGAAGG CTACCATCTG TTGGTAGACC TGCAGTCGCA GATTGTGCAG
ACCCCGGGAG GCAGGCATTA TGCTTTCGAG ATCGACCCGT TCCGCAAGCA TTGCCTGCTG
AATGGCCTTG ATGACATTGG CCTGACCTTG CAGCATGTGG ACGAGATCAA GGCGTTCGAG
GCCAGGCACA AGGCCGCCCA GCCCTGGCTG TTCAATGAAT CATAA
 
Protein sequence
MQAFTQLNGL VAPLDRANVD TDAIIPKQFL KSIKRAGFGP NAFDEWRYLD QGEPGKDNSK 
RPLNPDFPLN FPRYQGASIL LTRENFGCGS SREHAPWALL DYGFRAIIAP SFADIFFNNC
FKNGILPIVL DAEIVDSLFK EVEANEGYHL LVDLQSQIVQ TPGGRHYAFE IDPFRKHCLL
NGLDDIGLTL QHVDEIKAFE ARHKAAQPWL FNES