Gene Mfla_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1542 
Symbol 
ID4001132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1648453 
End bp1649511 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content56% 
IMG OID637938453 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_545651 
Protein GI91775895 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.74003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.452756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCCCT ACCTGATAAA ACGCCTGTTC ATTATGGTGC CGACATTGAT CGGCGTGCTG 
ACGCTGACTT TCTTCGTCAC CCAGTTTGTG CCTGGCGGGC CGGTGGACAG TGTGCTTTCG
CAACTGGATG CCGAAGACGT GCGTTCAGGC GAGGATGGGT CCAGCGGAGG CGGGTGGAGC
TATACCGCGC GGCAAGGCAT AGACGCGCAG CAGGTGGAGC AACTGACCGC TTTGTACGGT
TTCGACCGGC CGCCGCTTGA GCGTTATCTG TTGATGCTGA AGAATTTCCT CAGCTTCGAC
GTGGGAGAGA GTTATTTCCG TAACGAAAGC GTCTGGTCAT TGATCAAGGA CAAGCTGGGT
GTCTCGGTTT CTCTGGGAAT ATGGACGTTT GTCCTGACCT ACCTCATATC CATCCCGCTC
GGGATTGCCA AGGCCGTACG TGCCGGCAGC CGCTTCGATA TCATCACGAC GTTGCTGGTG
CTGGCAGGGT ATGCAGTTCC CGGCTTCGTG CTCGGTGTAT TGCTGATTGT CCTGTTCGGC
GGCGGTTCCT TCTGGGACAT CTTCCCGTTG CGCGGCCTGA CCTCGGACAA CTGGGAGGAG
CTGGATGCCT GGGGCAAGGT GACCGACTAT CTCTGGCACA TCACGTTGCC GGTGACGGCC
TCAGTAGTCA GCACCTTCGC CTTCAAGACA TTGCTCACCA AGAACACCTT TCTCGAGGAA
ATCAACCGCC AGTACGTATT GACCGCGCGA GCCAAGGGAC TTTCCGAGAA CAAGGTGCTA
TACAAGCACG TATTCCGCAA TGCCTTGCTT CCGCTGATTA CCGGCTTCCC GGGCACTTTC
ATTGCCGCCT TCTTCACCGG CAGCCTGCTT ATCGAGACAT TGTTTTCGCT CGACGGCTTG
GGGCTACTAT CGTTCGAGTC CATCAATAGT CGGGATTATC CGGTCGTGCT CGGCACCCTC
TACCTCTTCA CGTTGGTTGG ACTGTTCGTC AAGTTGGCAG GCGACATCGC CTACGTGCTG
GCTGACCCAC GTATCAAATT TGACGCCTTG GAGCCATAA
 
Protein sequence
MWPYLIKRLF IMVPTLIGVL TLTFFVTQFV PGGPVDSVLS QLDAEDVRSG EDGSSGGGWS 
YTARQGIDAQ QVEQLTALYG FDRPPLERYL LMLKNFLSFD VGESYFRNES VWSLIKDKLG
VSVSLGIWTF VLTYLISIPL GIAKAVRAGS RFDIITTLLV LAGYAVPGFV LGVLLIVLFG
GGSFWDIFPL RGLTSDNWEE LDAWGKVTDY LWHITLPVTA SVVSTFAFKT LLTKNTFLEE
INRQYVLTAR AKGLSENKVL YKHVFRNALL PLITGFPGTF IAAFFTGSLL IETLFSLDGL
GLLSFESINS RDYPVVLGTL YLFTLVGLFV KLAGDIAYVL ADPRIKFDAL EP