Gene Mfla_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1409 
Symbol 
ID4001110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1515485 
End bp1516126 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content54% 
IMG OID637938317 
ProductATP-dependent Clp protease proteolytic subunit ClpP 
Protein accessionYP_545518 
Protein GI91775762 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0666253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.826314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCACT ATCCAGCAAC CGCGCAGAGC CAGTTCGAGG CACAAGGTCT GGGGTACATC 
CCCATGGTCA TTGAGCAGAG TGGCCGTGGT GAGCGCTCTT ATGATATATA TTCCCGCCTG
CTCAAGGAAC GCATCATTTT CTTGGTGGGG CCAGTCAACG ACGCAACCGC CAACCTGGTG
GTGGCTCAGT TATTGTTCCT GGAAGCAGAA AATCCCGACA AGGATATCTA CTTCTACATT
AATTCCCCAG GCGGTTCGGT AACGGCAGGG ATGGGTATTT ACGATACTAT GCAGTTCGTC
AAGCCGGACG TCAGTACCTT GTGCGTGGGG CAAGCAGCCA GCATGGGCGC CTTGCTACTA
GCGGCAGGCG CGCAGGGCAA GCGTTTCTGT CTGCCCAATT CCCGCGTCAT GATTCACCAG
CCACTGGGCG GTTTCCAAGG CCAAGCATCC GATATCGAAA TCCACGCCAA GGAGATACTG
TTCCTGCGCG AAAAACTCAA TCACATCCTG GCCAGCCACA CGGGCCAGCC GGTAGAGAAA
ATTGCCTTGG ATACAGATCG TGACAACTTT ATGAGCGCTG AGCAGTCAGT AGCTTATGGC
ATCGTAGACA AGGTGATTGC CAGTCGGGCA GATGCTGCAT AA
 
Protein sequence
MIHYPATAQS QFEAQGLGYI PMVIEQSGRG ERSYDIYSRL LKERIIFLVG PVNDATANLV 
VAQLLFLEAE NPDKDIYFYI NSPGGSVTAG MGIYDTMQFV KPDVSTLCVG QAASMGALLL
AAGAQGKRFC LPNSRVMIHQ PLGGFQGQAS DIEIHAKEIL FLREKLNHIL ASHTGQPVEK
IALDTDRDNF MSAEQSVAYG IVDKVIASRA DAA