| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfl598 |
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| Symbol | rpoB |
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| ID | 2897590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mesoplasma florum L1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006055 |
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| Strand | - |
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| Start bp | 699074 |
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| End bp | 702928 |
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| Gene Length | 3855 bp |
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| Protein Length | 1284 aa |
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| Translation table | 4 |
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| GC content | 32% |
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| IMG OID | 637520663 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_053840 |
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| Protein GI | 50365415 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 86 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATATA AAATTAAAAA AGTAAACCGT GGCGTTGAAA GACGTGATTA TAGAAAAGTT
TCTGGTAATC TTGAGTTACC AAACTTAATC GAAATTCAAA CTAAAACTTT CGAATGATTC
AAAACAAAAG GAATTGATGA AGTTTTAAAT GAATTTTTTG CAATGAGCTC AAATGATGCT
AGTGCATCTC TTTTCTTAGA AGGATGAGAA ATTAAAGAAG CAAAAATTTC ACCATCAAAA
GCAAAAGAGC AATCAAAAAT CTATGATGCT CCAATTTATG TAGACTTGCA ATTAATGTTT
ACAAAAACTG AAGACATTTC AAAAGAATTT GAAGAAATTG TAGAAAAAGA TGTTAAGAAA
GTATTATCAA ATTGAATTGC TGAAAAAACA GATTCAAAAA ACGTTTCACT TGTTAAAAAC
ACTGATAACA TTTATTTCTT TGATGTTAAG TTAAAAGGAA CAGAAAAAAA TGACTTATTC
CAAATTACAA TTTTAGAAGA AAAAGAAGAT ATTATTGTAG CAGAAGTTAG TGTAAGAAAA
TGAGGACAAG TATTCTTTGG AGATTTCCCT CTAATGACTG ATGCCGGAAC ATTTGTTATT
AATGGTTCAC AAAAAGTTAT TGTTTCACAA TTAGTTAGAT CACCTGGTTC ATATTTCAAA
ACAGAAATCA ATAACAAGAC AGGGGAAAGC CTATACAATG GTGATATTAT CCCAAGTCGT
GGTACTTGAT TAGAGTTTGA AACTGATACT AAAAAAACTG CTGAAACAAC AAATTCACTA
TTTGTTAAAA TCGACAAATC AAGAAAAACA ACTGCAACAT CATTCTTGAA AATCTTAGGA
TTAGATAGAG ATACAATCTT AAATATTTAT GATAAAGATA AAGTTATTGT TGAAACATTA
AAAAATGACA ACGATACTGG TGATACATAT GCAGACTGAG CACAACACGT TCAAGAAATT
TATAAAAAAA TTAGACAAGG TGAAACTGCT ACTTCTGATG GAGCATCAAA ATACATTAAC
GGATTATTAT TTGACCGTAG AAAATACGAT TTAACTAAAG CAGGTAGATT CAAATTACAA
CAAAAATTAG CTGTTAAAAA TCGTTTAATG GGAAGAATAT TAGCTGAAGA TATTGTTGAT
GCTAGCGGAA AAATTTTAGT TGCTAAAAAT ACTGAAATTT CAAAAGCAAA TATTAAAGAA
GTTTCTGATG CATTATCACA AGATGGTGTA ATGGTTTCTT CAATTGAATA CAGAGAAGAT
ATCCCTGGTT CACGTCAAAT CCAAAAAGTT AAAGTTTACC AAGACAATAA CTCAAAAGAT
GAAACATTTA CAATTGTTGG AATTACTCCT AACTCAAAAG AAGAACACAT TACAGTTGTT
GATATTGTAG CTACTGTTTC TTACTTATTA GGATTAGAGT ACAACATTGG TGAATATGAT
GATATTGATA ACTTAGCTAA CCGTCGTGTT AGAACAGTTG GAGAGTTATT ACAAAATCAA
TTCAGAATGG GATTAACACG TATTGATAAA AACGTTAAAG AAAAACTTTC AACAAGTGAT
TTATACAAAG TTAAAGTTTC AACAATTATT AATGCAAAAC CATTAACTGC TGTAATTGGA
GAGTTCTTCA ACTTATCACA ATTATCACAA TTTATGGATC AAATAAACCC ATTAGCAGAA
TTAACAAATA AACGTAGATT AACTGCTTTA GGACCTGGGG GATTATCAAG AGACCGTGCC
AGTTTAGAAG TGCGTGACGT TCACCCTTCT CACTATGGAA GAATCTGTCC TATTGAAACT
CCAGAGGGAC CAAACATTGG ATTAATTAAC AACTTATCAA CTTATGCTAT TGTTGATGAA
TTAGGATTTA TTAGAACACC TTACTTAAAA GTTATTGATG GTGTAATTCA AAATGAACAT
GAATATTTAT CAGCTGATGA AGAAAAAGAA TACATTATTT CTCAATCAAA CGTTACTAAA
GATGAAAATG GAAAAATTTT AGATGAAACT GTTGTTTCAC ATTACAAAGG TGATGATTAC
ATTGCTAAAG TAAGTGAAGT TCAATTTATC GACGTTTCAC CAAAACAAAT CGTTTCTGTT
GCTACTTCAG CAATTCCATT CTTAGAAAAC GATGATGCCA ACCGTGCACT TATGGGTGCT
AACATGCAAC GTCAAGCAGT TCCTACAATT GTTCCAGAAT CACCATTCGT TGGAACAGGA
ATTGAATTTG AAGCAGCTAG AGATTCAGGA GTATGTATTG TTGCTACAGA AAACGGTATT
GTAAAATACG TAGATGCAAA ACAAATTACT GTTGAATCAA AAGCAGGAAT TAAAACTTAT
ACATTAGCAA ACTTTGAACG TTCAAATAAC GGAAGTTCAA TTGTACAAAA ACCAATTGTT
AAAGTTGGAG ATTCAATAGA AGCAGGTCAA ATCATCGCCG ATGGTCCATC TGTTGATAAT
GGAGAATTAG CTTTAGGACA AAACGTAGTT GTTGCCTTTA CTACATATAA TGGTTACAAC
TTTGAGGATG CTATTGTTAT GTCTGAAAGA GTAATCATGG AAGACAAATT TACTTCAGTT
CATATTGATG AATATGTATT AGAAGTACGT AATACAAAAC AAGGAGCTGA AGAAATTACT
TCAGAAATCC CAAACATTAG TGACAATGCT AAAAAATACT TAGATAACGA AGGTATTGTA
GCTATTGGTA CTGAAGTTAA AACAGGAGAT ATTTTAGTTG GTAAAGTAAC TCCAAAAGGA
CAAACTCAAT TATCACCAGA AGATAAATTA TTACATGCTA TCTTTGGAGA AAAATCAAGA
TCAGTTAAAG ATAACTCATT AAAAGTTCCA AATGGTGGAG AAGGTATTGT TCAATCTGTT
AAACGTTTCA AAGCTAAATC AGCAGCGAAC CCAGATGGTA TTGATTTACC AGCAGATGTA
TTAGAAGTAA TTAAAGTTTA TATTGTTCAA AAACGTAAAA TCCAAGAAGG GGATAAAATG
TCAGGACGTC ACGGTAACAA AGGGATTATC TCAAAAGTGT TACCTGTAGA AGACATGCCT
CACTTAGAAG ATGGTACACC AGTAGATATT CTATTGAACC CACAAGGGAT TCCATCACGT
ATGAATATTG GACAAATCTT AGAAATCCAT TTAGGAATGG CTGCTAAAAA ATTAGGAGTT
AAAATTGCAA CTCCAGTTTT CGAAGGAGTT AACAGTAATG ATTTAGATGA AATCATGGCT
GAAGCTGGAA TGGAAAACTA TGGAAAAGTT AAATTAATTG ATGGTCAAAC AGGGGAAGCA
ATTGACAAAC CAATTTCTGT TGGGGTTATG TACATGTTGA AACTTTCACA CATGGTTGAT
GACAAACTTC ACGCAAGAAG TGTTGGACCA TACTCATTAA TTACTCAACA ACCTCTTGGA
GGAAAAGCAC AAAACGGGGG ACAACGTTTT GGAGAAATGG AAGTTTGAGC GTTAGAAGCT
TATGGGGCAG CTCATACTCT AAGAGAAATC TTAACTATTA AATCAGATGA CTTAAAAGGT
CGTACAAAAA CTTATGAAGC TATCGTAAGA TCAAAAAACA TTCCTACACC AGGAACACCT
GAATCATTTA ACGTTCTTTC AAAAGAAATT ATGGGATTAG GATTTGATAT TTACTTATTA
GATAACAAAG GTAATAAATC ACAAATTAAT GCATACGATG ATGACAACGA TTTAATTAAC
GATGAAAGTA TGAAACATGC ATCAATTGAT AAATTAACTT TTGAAGACTC AATATCACTT
GTTGAAATTG AAGACCTAGA TAGTTTTGAA GAAGTAGATG AAAGTGAAAT AAACCTTTCA
TTTGAAGAGG AATAG
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| Protein sequence | MAYKIKKVNR GVERRDYRKV SGNLELPNLI EIQTKTFEWF KTKGIDEVLN EFFAMSSNDA
SASLFLEGWE IKEAKISPSK AKEQSKIYDA PIYVDLQLMF TKTEDISKEF EEIVEKDVKK
VLSNWIAEKT DSKNVSLVKN TDNIYFFDVK LKGTEKNDLF QITILEEKED IIVAEVSVRK
WGQVFFGDFP LMTDAGTFVI NGSQKVIVSQ LVRSPGSYFK TEINNKTGES LYNGDIIPSR
GTWLEFETDT KKTAETTNSL FVKIDKSRKT TATSFLKILG LDRDTILNIY DKDKVIVETL
KNDNDTGDTY ADWAQHVQEI YKKIRQGETA TSDGASKYIN GLLFDRRKYD LTKAGRFKLQ
QKLAVKNRLM GRILAEDIVD ASGKILVAKN TEISKANIKE VSDALSQDGV MVSSIEYRED
IPGSRQIQKV KVYQDNNSKD ETFTIVGITP NSKEEHITVV DIVATVSYLL GLEYNIGEYD
DIDNLANRRV RTVGELLQNQ FRMGLTRIDK NVKEKLSTSD LYKVKVSTII NAKPLTAVIG
EFFNLSQLSQ FMDQINPLAE LTNKRRLTAL GPGGLSRDRA SLEVRDVHPS HYGRICPIET
PEGPNIGLIN NLSTYAIVDE LGFIRTPYLK VIDGVIQNEH EYLSADEEKE YIISQSNVTK
DENGKILDET VVSHYKGDDY IAKVSEVQFI DVSPKQIVSV ATSAIPFLEN DDANRALMGA
NMQRQAVPTI VPESPFVGTG IEFEAARDSG VCIVATENGI VKYVDAKQIT VESKAGIKTY
TLANFERSNN GSSIVQKPIV KVGDSIEAGQ IIADGPSVDN GELALGQNVV VAFTTYNGYN
FEDAIVMSER VIMEDKFTSV HIDEYVLEVR NTKQGAEEIT SEIPNISDNA KKYLDNEGIV
AIGTEVKTGD ILVGKVTPKG QTQLSPEDKL LHAIFGEKSR SVKDNSLKVP NGGEGIVQSV
KRFKAKSAAN PDGIDLPADV LEVIKVYIVQ KRKIQEGDKM SGRHGNKGII SKVLPVEDMP
HLEDGTPVDI LLNPQGIPSR MNIGQILEIH LGMAAKKLGV KIATPVFEGV NSNDLDEIMA
EAGMENYGKV KLIDGQTGEA IDKPISVGVM YMLKLSHMVD DKLHARSVGP YSLITQQPLG
GKAQNGGQRF GEMEVWALEA YGAAHTLREI LTIKSDDLKG RTKTYEAIVR SKNIPTPGTP
ESFNVLSKEI MGLGFDIYLL DNKGNKSQIN AYDDDNDLIN DESMKHASID KLTFEDSISL
VEIEDLDSFE EVDESEINLS FEEE
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