| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4848 |
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| Symbol | |
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| ID | 5835332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5416572 |
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| End bp | 5417501 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641370645 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001642287 |
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| Protein GI | 163854244 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTT CGCGCGCCTT GAGAATCGGA ACCCGCGGCA GCCCGATGGC GCTGGCCCAG
ACCGGCATGG TCCGCGATCG GATCGTGGCG GCCAATCCGG GATTGGAGAC GGAGATCGTC
GTCGTCTCGA CCGTGGCCGA CCGCGTGCTT GATCGGCCCC TCTCCGAGAT CGGCGGCAAG
GGCCTGTTCA CCAAGGAACT CGAACAGGCC CTGTTTGCCG ACGAGATTGA TGTTGCCGTC
CACTCGATGA AGGACGTGGA GACGTGGCTG CCCGACGGGC TCGCCATCGC CTGCATCCTC
GAACGCGATG ATCCGCGCGA CGCCTTCCTC AGCGCGAATG GGGCCAACGG CTTGGCCGAC
CTGCCCCCCG GTGCACGGGT CGGCACCTCC TCGCTCAGGC GGGGCGCGCA GGTGCTGATG
CACCGGCCCG ATCTCACCAT CGTGCCCCTG CGCGGCAATG CCAACACCCG GATGCGCAAG
CTGGAGGCGG GGGAGTGCGA CGCCACGCTG CTGGCGCTCG CCGGCCTGCA GCGCCTCGGG
ATGGCCGATG TCGCCCGCAG TGTGCTGTCG GTGGAGGAAA TGCTCCCGGC CGTGGCGCAG
GGCGCACTCG GCATCGAGTG CCGAGCCGGC GACGACGCGA TCCGGGCGCT GCTGGCGCCG
GTCGCCTGCG CCACCACGAC GACGGCGCTC GACGCGGAAC GCGGGCTGCT CGCCGAACTC
GACGGTTCGT GCCGCACCCC CATCGCGGCG CTTGCGCAGG TGAAGGGGGA CCGCATCAGC
CTCGACGGGT TGCTGTTCCT GCCGGATGGC AGCCGCCACT GGGCGGTCCA TCGCGAGGGA
CTGGCCGCGG ATGCCGACAC AATCGGCCGC GATGCAGGGG CCGAGCTGAA GCGGGCGGCG
GGCGACGTCT ACTTCGCCCA CCTCAAGTAG
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| Protein sequence | MSLSRALRIG TRGSPMALAQ TGMVRDRIVA ANPGLETEIV VVSTVADRVL DRPLSEIGGK
GLFTKELEQA LFADEIDVAV HSMKDVETWL PDGLAIACIL ERDDPRDAFL SANGANGLAD
LPPGARVGTS SLRRGAQVLM HRPDLTIVPL RGNANTRMRK LEAGECDATL LALAGLQRLG
MADVARSVLS VEEMLPAVAQ GALGIECRAG DDAIRALLAP VACATTTTAL DAERGLLAEL
DGSCRTPIAA LAQVKGDRIS LDGLLFLPDG SRHWAVHREG LAADADTIGR DAGAELKRAA
GDVYFAHLK
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