Gene Mext_4593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4593 
Symbol 
ID5834892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5134050 
End bp5135411 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content73% 
IMG OID641370387 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001642032 
Protein GI163853989 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.158973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC GCGAGAGACT TCTGGCGGCG GGCGGACTCG AGGGCCTGTT CCTGTCCGAT 
CACCGCAGCA AAAAAGATCT CGCCGGGATC GTCTCCGGCG AGCGCGACGC CGCCGCGACC
GCGGCGCTTG CCGGCCGCCG GGTGCTGCTC GCGGTCGGTG GGCAGATGGC GGCGGCCCGC
GCCATGATCG CGCTCGACGG CCTCGCGGCC CGGCTCGCCC TCGTCCCCCC GAAGCTCGCG
CCGGAGCACA TCGCCCGGAT CGCTCACGAT TCCGAGGCGG ACATCTGCGT CGCCGATGCC
GAAGGGCTGC CCCCCGATGC CCTGCCGGGC CTGCCCCGGA TCGACGCGGC CGACGCGTTC
CGCGCGGGCT CCGAGACATC GCGGGAGACG GAGTGGGCAT TGGCCACCTC CGGCACCACC
GGCGCGCCGA AGCTCGTCGC CCACACCCTC GAGGGCCTCG CCGGCGGCAT CAACACGGCT
GCGGCGCCGG AGCCCGGCAC GGTGTGGAGC ACCTTCTACG ACATCCGCCG CTACGGCGGC
CTCCAAGTGT TCCTGCGGGC GATGCTCGGG CCGTCCTCGC TCATGCTCTC CGACGCGGGC
GAGCCGGTGC GCGACTATCT CGTCCGCGTC GGTGCGGCGG GCGTCACCCA CATCCTCGGC
ACGCCCTCGC ACTGGCGCCT CGCCCTGATG AGCGCGGCAC TCGATAGGCT GAGCCCCCGC
TACGTGCGAC TCTCAGGCGA GATCGCCGAC CAGAACATCC TCGACGCCCT GCGCGACGCC
TTCCCTGAGG CGCGCATCGC CCACGCCTAC GCCTCGACCG AGGGCGGCGT CGGCTTCACC
GTCGAGGACG GGCAGGAGGG TTTCCCGGCC GCGCTGGTCG GCACCCGCGC CGGGATCGAG
ATCACCGTGC GCGAGGACAG CCTGTTCGTG CGCTCCGGCC GAACCGGGCG GCGCTACCTT
GGCGCGGCGC CCGAGGCGCT GATCGCCGGA GACGGCTTCA TCGATACCGG CGACCTCGTG
GAGCGACGGG GCGAGCGCTA CCACTTCCTC GGCCGGCGCA GCGGCGTGAT CAATGTCGGC
GGCGCCAAGG TGCAGCCGGA GGAGGTCGAG ACCGTCATCA ACGTCTTCCC CGGTGTCTCG
ATGTCCCGCG TGCGCGCCCG GCCCAACCCG ATCCTCGGCG CGGTGGTCGA GGCGGAGGTG
GTCCTGCGTG CCGATGCGGG CACGGATCAG GCGGCGCTGA AGAAGGCGAT CATCGCCCAC
TGCCGCCCGC GCCTGGCCGG ACACAAGGTG CCGGCGAGCG TCAAGTTCGT GGATGCGCTG
CCGATCACGT CGGGCGGCAA GCTGGTGCGG AGGGGCGCGT GA
 
Protein sequence
MILRERLLAA GGLEGLFLSD HRSKKDLAGI VSGERDAAAT AALAGRRVLL AVGGQMAAAR 
AMIALDGLAA RLALVPPKLA PEHIARIAHD SEADICVADA EGLPPDALPG LPRIDAADAF
RAGSETSRET EWALATSGTT GAPKLVAHTL EGLAGGINTA AAPEPGTVWS TFYDIRRYGG
LQVFLRAMLG PSSLMLSDAG EPVRDYLVRV GAAGVTHILG TPSHWRLALM SAALDRLSPR
YVRLSGEIAD QNILDALRDA FPEARIAHAY ASTEGGVGFT VEDGQEGFPA ALVGTRAGIE
ITVREDSLFV RSGRTGRRYL GAAPEALIAG DGFIDTGDLV ERRGERYHFL GRRSGVINVG
GAKVQPEEVE TVINVFPGVS MSRVRARPNP ILGAVVEAEV VLRADAGTDQ AALKKAIIAH
CRPRLAGHKV PASVKFVDAL PITSGGKLVR RGA