| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4558 |
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| Symbol | |
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| ID | 5835233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 5088504 |
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| End bp | 5090849 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641370352 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_001641997 |
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| Protein GI | 163853954 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0372374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAA TCTCGGTCAC CTGGGCCAAT GAATACTCGA TGGGGTTGGC CGGGTGGCAG
GCTGGTCTAA TCCTCGCGAC GGCACAGGCG GCTGCCGACG CGTGGGGCAA GTACATCCAA
GTCGAGAGCA CGTTCGATAT CGCGATCGGG ATCGGCAATG TCGGCGGCGC CCTCGCCAAC
GGCGGCCCGC AATGGACCTG GAACGGGAGA TGGTGGGAAA ACACCCCCAT CCTGAAGGCC
CGCGAGGGGT ATGACCCGAA CGGCGGCGCG CAGGACGCCA ACCTCACGCT CGGTGAGCAT
ACGTTCCGCG ATTGGTTCTA CGATCCGACA GGTGTTGCGG CCGCGCCCGG CAACAGGTTC
GACGCCTTCA CCATTTTCCA GCACGAGATC GGCCACGGGC TGGGCTTCCT CGAATTCCCG
GCCACGGTCG GAGCCAACGG GCTGCTCCTC TTCAATGGTG AGAACACGCG GACGGTTCTC
GGCGGCCCGG TCGTGCTCGA TGGGGCCCGG GCGCATGTGT GGGGATCCGA GGATCTCATG
GATCCCTATC TCGGCTGGGG CCAGCGGTCC TACATCTCGG ACCTCGACCT GGCGATGCTT
CAGGACAAGG GGATGCCGAT CTCGACCGAG CGGGCCGACA AGATGTGGCT CGGCAACCGG
GCCGACACCT TCTTCGCCTA TGGCGGTGAC GACTGGATTG ACGGCGGCTG GGGCGACGAC
AAACTCTTCG GCGGCGTGGG CAACGACACG CTCATCGGCG GGGACGGGAA CGACGCGCTG
GACGGGGGCG CGGGCGACGA CACGCTCATC GGCGGGAACG GGGGCGACAC GCTGGAAGGG
GGCGAGGGCA TCGACAGGGC CGTGTTGACG GGCCGGAGCC AGGACTACGT CGCGCTCTAC
GGCGCCGCCG GTTCACTCGC CATCAAGCAC CTCGGCTCCG GCAACATCGA CACGCTGACC
TCGATCGAGA CGCTGAACTT CGACGACACC GTGCTCGGCA TGTCGGGCCT CCTCGCCCAT
CTGCAGCAGC GCTTCGGGCC CGTACAGGCC GGCAAGGCGC CCTACGAGAT GGCCCTGAAC
GCCGCCGCGG ACGAGGCTTA TCGCCCCGAC ATCCCCGAGA TCGACGGCGC GTTCAGCGTC
ACCGCGCGGG TGCGGTTCGA CGACCTCGCC GGCGGCCATT TCCAGCGCGT TTTCGATACC
GGCAACGGTC CGGACAGCGA CAACATCTGG CTCGGTCAGG TCGGCAACGG ACGGGACATG
GCCTTCGAGA TCCTCGACGG CGCGGTCAAG CATAGCATCA CCGCCAGGGA CGGCATCACC
CAGGGCGTCG AGGCGCGCTG GACCGCCGGT GTCGACGAGC GCGGATGGAT GTCGCTGTAC
AAGGACGGTG TGCTCGTCGC CGAGGGTCAG GGGGTGGTGC CGCGCGACCT GACGCGCGCG
AAGGATTTCG TGGGCCAATC CAACTGGGCG CAGGACGCTG CGCTGAAGGG CGGCATCTAC
GACCTGACCT TCAAGGACAA CCTGCCCGAC ATCCACGGCG CCTTCACGGC CAGTGCGACG
GTCCGGTTCG ATGATCTCGA TGCCGGCGCG TGGCAGCGGG TCTACGACAT CGGCAACGGT
GCCGGCGCCG AGAACGTCTT CCTCGGCCAG ATCGGCACCT CCAACGACAT GCAGTTCATG
ATCCTGAACG GCACCAGCTC CGCCAACATC GTGGCCAAGG GCGCGATCGT CGAAGGCCAG
GAAGCGACCT GGACGACCAG CGTCAACGAG ACCGGTTGGA TGCGCCTGTT CAAGGACGGC
GTGCTCCTGG CCGAGGGACA GGGCATCGTC CCGAAGGACG TCGTGCGGAC CAACGAGTTC
GTCGGCAAGT CCAACTGGAC GTGGGACAAA CCGCTCGTCG GCGAGGTGAG CGACCTGACC
ATCACGCCGT TCAAGGGCAT CCCGGAGATC GACGGCGCCT TCAAGATGTT CGCCGAAGTC
CGCTTCGACG ATCTCGCCCA CGGAAACTAT CAGCGCGTGT TCGATACCGG TAACGGGCGG
GACAGCAACA ACATCTGGCT CGGTCAGGTC GGCAACGGTG ACGACATGGC CTTCGAGATC
CTCACGGGCG CCACGAAACA CCGGATCACG GCGGCGGACA CCATCGTCGA GGGTGAGATG
GCGAAGTGGC AGGCCAGCGT GGACGAGGCC GGCTACATGC GCCTGATCAA GAACGACAAG
CTCGTGGCCG AGGGCCAGGG CGCGGTTCCG CTGGATGTGC TGCGCACCAG CGATCTGGTC
GGCCAGTCCA ACTGGTCGTG GGATACCGCG CTGGCCGGAC AGGTGAAGGA TCTGATCTTC
GCCTGA
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| Protein sequence | MAKISVTWAN EYSMGLAGWQ AGLILATAQA AADAWGKYIQ VESTFDIAIG IGNVGGALAN
GGPQWTWNGR WWENTPILKA REGYDPNGGA QDANLTLGEH TFRDWFYDPT GVAAAPGNRF
DAFTIFQHEI GHGLGFLEFP ATVGANGLLL FNGENTRTVL GGPVVLDGAR AHVWGSEDLM
DPYLGWGQRS YISDLDLAML QDKGMPISTE RADKMWLGNR ADTFFAYGGD DWIDGGWGDD
KLFGGVGNDT LIGGDGNDAL DGGAGDDTLI GGNGGDTLEG GEGIDRAVLT GRSQDYVALY
GAAGSLAIKH LGSGNIDTLT SIETLNFDDT VLGMSGLLAH LQQRFGPVQA GKAPYEMALN
AAADEAYRPD IPEIDGAFSV TARVRFDDLA GGHFQRVFDT GNGPDSDNIW LGQVGNGRDM
AFEILDGAVK HSITARDGIT QGVEARWTAG VDERGWMSLY KDGVLVAEGQ GVVPRDLTRA
KDFVGQSNWA QDAALKGGIY DLTFKDNLPD IHGAFTASAT VRFDDLDAGA WQRVYDIGNG
AGAENVFLGQ IGTSNDMQFM ILNGTSSANI VAKGAIVEGQ EATWTTSVNE TGWMRLFKDG
VLLAEGQGIV PKDVVRTNEF VGKSNWTWDK PLVGEVSDLT ITPFKGIPEI DGAFKMFAEV
RFDDLAHGNY QRVFDTGNGR DSNNIWLGQV GNGDDMAFEI LTGATKHRIT AADTIVEGEM
AKWQASVDEA GYMRLIKNDK LVAEGQGAVP LDVLRTSDLV GQSNWSWDTA LAGQVKDLIF
A
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