Gene Mext_4545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4545 
Symbol 
ID5832116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5077991 
End bp5079277 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content72% 
IMG OID641370339 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_001641984 
Protein GI163853941 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0197332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAAC CGCGCTCCTC CTCCACCCAC GATGCCCTGG GACGCCCGCT CGTCGCGGTG 
ACGGGCCTCG GCATCGTCAC CTCGCTCGGC CGCGGCGCCA CCGAGAATTG GGACGCGCTG
ACGACCGGAC GCTCCGGCAT CCGCGCCATC AGCCGCTTCC CCACCGAGGG CCTGCGCACC
CGCATCGCCG GCACCGTCGA TTTCCTCGAC ACCGACCCGC TGGTGGCCCC GCTCCTGTCT
GAGCGCTTCG CCATGGTGGC GGCCGAGGAG GCGGTGACGC AGTCCGGCAT CGGCGCGGGC
TTTCCGGGCG GGCTGTTCGT GGCGGTGCCG CCGGTCGAGA TGGAATGGCC GCAGCGGCAG
GCTCTGGCGG AGGCCGCGGG CGAGCCCGAC GCGGTGACCT ATGCCGGCCT CCAGCGCGCC
GCCGCGTCCC GCCGTTTTGA CGCGTGGCAC GACCTGTTCA TCTTCGGCAC GGTGGCCGAC
CGGCTCGCCG ACCGCTTCGG CACCCGCGGT TCGCCGATCT CGCTCTCGAC CGCCTGCTCG
TCGGGCGCCA CCGCGATCCA GCTCGGCGTC GAGGCCATCC GCCGGGGCGA GATGGACGCC
GCGCTCTGCA TCGGCACCGA CGGCTCGGTG AATCCGGAAT CGCTGATCCG CTTCTCGCTG
CTCTCGGCGC TCTCGACGCA GAACGATCCG CCGGAGGGCG CCTCGAAGCC GTTCTCGAAG
AACCGCGACG GCTTCGTTAT GGGCGAGGGC GCCGCCGCCC TGGTGCTAGA AAGTGCTGAA
TCGGCGCGAG CGCGCGGGGC AAAGATCCTC GGCTACGTCC TCGGCTGCGG CGAGAAGGGC
GACGGCTTCC ACCGGACCCG CTCCAGCCCC GACGGGGCGC CGGTCATCGC GGCGATGCGC
GCGGCCCTCG ATGACGCCGG CGTCACGCCC GAGGCCATCG ATCACGTCAA CGCCCACGGC
ACCTCGACGC CGGAGAACGA CAAGATGGAG GCGCTCGGCT GCTCGGCGGT GTTCGGCGAG
CGCGTGGCCC GCCTGCCGAT CTCCTCCAAC AAGTCGATGA TCGGCCATAC GCTCACCGCG
GCCGGCGCGA TCGAGGCGGT GGTCTCGCTG CTGACGATCC AGAAGGGGCG CATCCCGCCG
ACCATCAACT ACGCGGTGCC CGATCCGGCG CTCGTCCTCG ACGTGGTCGG GACCGCCCGC
GACACCCGCG TCTCGCGGAT CCTCTCGAAT TCCTTCGGCT TCGGCGGGCA GAACACCTGC
CTCGTCCTGG GAGACGAGCC GGCATGA
 
Protein sequence
MPEPRSSSTH DALGRPLVAV TGLGIVTSLG RGATENWDAL TTGRSGIRAI SRFPTEGLRT 
RIAGTVDFLD TDPLVAPLLS ERFAMVAAEE AVTQSGIGAG FPGGLFVAVP PVEMEWPQRQ
ALAEAAGEPD AVTYAGLQRA AASRRFDAWH DLFIFGTVAD RLADRFGTRG SPISLSTACS
SGATAIQLGV EAIRRGEMDA ALCIGTDGSV NPESLIRFSL LSALSTQNDP PEGASKPFSK
NRDGFVMGEG AAALVLESAE SARARGAKIL GYVLGCGEKG DGFHRTRSSP DGAPVIAAMR
AALDDAGVTP EAIDHVNAHG TSTPENDKME ALGCSAVFGE RVARLPISSN KSMIGHTLTA
AGAIEAVVSL LTIQKGRIPP TINYAVPDPA LVLDVVGTAR DTRVSRILSN SFGFGGQNTC
LVLGDEPA