| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4544 |
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| Symbol | |
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| ID | 5832115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5077221 |
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| End bp | 5077994 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641370338 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001641983 |
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| Protein GI | 163853940 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0563576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGG ACATGAGCGA CGAAAGAAAA TCCGTCCTCG TCGTCGGCGG CGCCTCCGGG
CTCGGTGCAG CCACCGTCCG CGCCCTGGCG GCAGCCGGCC ACGCCGTTAC CTTCACCTAC
CGCTCCTCGC CGGAGCGGGC GCAGGCGCTG GCCGACGAAC TCGTGCCGAT GCATGGCGAA
GGCAGCGTCA CCGCACGCGC CCTCGACCTG TCGGACCGCG ACGCGGTGGA GGCGTTCTGC
GAGTGGGCCG AGGGCCAGGG CTTCTACGGC TACGTCCACA ATGCCGGCCA GTCGGCGGAC
GCGCTGGCGG CCATGCTCGA CCGCGAGCGG GCCGAGGCGG CGATGCAGGT GAACTTCTGG
TCGATGACCC GGATTGCCAA GGCGCTGGTG CGTGGGATGA TCCGGGCGCG CGCCGGCCGC
ATCGTCGCCA TCGGTTCGGT GGCGGCGCTC CAGGCCAATG CCGGCAACGC GGCCTACGCG
GCGACCAAGG GCGCCCTGAT CGCCTATTGC CGCACGTTGG CGATCGAGTC GGCCAAGCGC
GGCGTCACCG TCAACGTCAT CGCGCCCGGC TTCATCGATA CCGAGATGCT GGCGGCCTAT
GCCAGCCACC GCGAGGGGAT CGAGCGCCAG ATCCCGCTCG GACGTTTCGC CAAGCCGGAA
GAGGTCGCGG CAATGGCCGC CTTCCTGATC GGGGAGGGCG GGGCCTACAT TACCGGCGCG
GTGCTGCCCG TCGATGGCGG GTTGACCGCG ATGATGGGCA TCCACCGCAC CTGA
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| Protein sequence | MSADMSDERK SVLVVGGASG LGAATVRALA AAGHAVTFTY RSSPERAQAL ADELVPMHGE
GSVTARALDL SDRDAVEAFC EWAEGQGFYG YVHNAGQSAD ALAAMLDRER AEAAMQVNFW
SMTRIAKALV RGMIRARAGR IVAIGSVAAL QANAGNAAYA ATKGALIAYC RTLAIESAKR
GVTVNVIAPG FIDTEMLAAY ASHREGIERQ IPLGRFAKPE EVAAMAAFLI GEGGAYITGA
VLPVDGGLTA MMGIHRT
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