| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4070 |
|---|
| Symbol | |
|---|
| ID | 5831067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4527050 |
|---|
| End bp | 4527538 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641369861 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001641511 |
|---|
| Protein GI | 163853468 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.256894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGAGA CGGCGATGAA CTCGGTCAAG GAACGTCTGG AAGCGCTCGG CCTGAAGCTG
CCGAAGGCGG CGGCCCCGGT CGCGAACTAC GTGCCCTATA TCCGCACCGG CAACCTCGTC
GTCATCTCCG GCCAGATCTG CTTCGGGCCG GACGGCACCC TCGACCCGGC GCACAAGGGC
AAGCTCGGCG CCGAGGTCTC GGCCGAGCAG GGCATCGCGG CGGCCCGGCT CTGCGCGCTC
AACGTGCTGG CCCAGGTCCA GGCGGCGGTG GGCGACCTCG ACCACGGCGT CGTGCAATGC
GTGCGGCTCG GCGGCTTCAT CAACGCGGTG CCGAGCTTTG CCGGTCTCGC CCCGATCATG
AATGGCGCCT CCGACCTGAT GGTCCAGATC CTCGGCGACC GCGGCCGCCA TGCCCGCTCG
ACGGTGGGGG TCGCCGAACT GCCCCTCGAC GCGGCGGTCG AGGTCGAGGC GATGTTCGAG
GTCGCGTGA
|
|---|
| Protein sequence | MRETAMNSVK ERLEALGLKL PKAAAPVANY VPYIRTGNLV VISGQICFGP DGTLDPAHKG
KLGAEVSAEQ GIAAARLCAL NVLAQVQAAV GDLDHGVVQC VRLGGFINAV PSFAGLAPIM
NGASDLMVQI LGDRGRHARS TVGVAELPLD AAVEVEAMFE VA
|
|---|
| |