Gene Mext_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3998 
SymbolrplK 
ID5833405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4437980 
End bp4438429 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID641369790 
Product50S ribosomal protein L11 
Protein accessionYP_001641440 
Protein GI163853397 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.748509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.915544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA AGATCACGGG CTACGTGAAG CTTCAAGTCC CGGCCGGCGC CGCCAACCCG 
TCGCCGCCGA TCGGTCCCGC GCTCGGTCAG CGCGGCCTCA ACATCATGGA ATTCTGCAAG
GCCTTCAACG CGAAGACCGC GCAGATGGAG AAGGGCACCC CGATCCCGGT GATCATCACC
GCGTATCAGG ACCGCTCCTT CACCTTCGAG ATGAAGCAGC CCCCGGTCAC CTTCTTCCTG
AAGAAGGCGG TTGGCCTGAA GATCGGCAAG AAGCCGGCCT CCGGCTCCAA GACCCCGGGC
AAGGGCCCGA CCGTCGGCAA GATCACCGAA GCCCAGCTTC GCGAGATCGC CGAAAAGAAG
ATGCCCGACC TGAACTGCGA CTCCGTCGAT GCGGCGGTCG CGATGATCCG TGGCTCCGCG
CGAGCCATGG GCCTCGAAGT CGTCGCGTAA
 
Protein sequence
MAKKITGYVK LQVPAGAANP SPPIGPALGQ RGLNIMEFCK AFNAKTAQME KGTPIPVIIT 
AYQDRSFTFE MKQPPVTFFL KKAVGLKIGK KPASGSKTPG KGPTVGKITE AQLREIAEKK
MPDLNCDSVD AAVAMIRGSA RAMGLEVVA