Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3963 |
Symbol | |
ID | 5835620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4404060 |
End bp | 4404752 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641369754 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001641405 |
Protein GI | 163853362 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.54526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGGC ATTTCGACCT CTCCGTCGTC GCCAATTCGC TGCCCTACCT GTTCGGCGAG GGGATGGTGT TCACGCTGAC GCTCACCGCG CTCGCGGCGA GCGGCGGCAT CGTGCTCGGC ACCGGGCTGG CGCTGCTGCG GCTCTCGGGC GTGCCGGGTC TGACGCACGC GGCCAAGTTC TATGTCGAGC TGATGCGGTC CCTGCCGCTC GTGCTGGTGA TCTTCTGGTT CTACTTCCTC GTGCCCTATC TCGGCGCCTG GGCGATCGGC GCGGACACGC CGATCCAGGT CGGGGCGTTT GCCAGCGCGC TCGTCACCTT CACCCTGTTC GAGGCGGCCT ACTTCTCCGA GATCGTGCGG GCCGGCATCC AGTCGATCCC GAAGGGCCAG AGCGCGGCGG CCCGGGCGCT CGGCATGAGC TACGCGCAGG TCATGCGGCT CGTGGTGCTG CCGCAGGCGT TCCGCAACAT GGTGCCGCTG CTGCTGACGC AGACGATTGT GCTCTTTCAG GACACCTCGC TCGTCTACGT GCTCTCGCTG ACCGATTTCC TCGGTGCCGC CTCCAAGGTG GCGCAGCGCG ACGGGCGGCT GGTGGAGATG TACCTGTTCG CCGCGCTGGT CTACTTCGCC GTCTGCTTCG CAGCCTCGCT GCTGGTGCGC CGGCTCCAGG CCCGCACGGC GATCGCCCGG TGA
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Protein sequence | MFGHFDLSVV ANSLPYLFGE GMVFTLTLTA LAASGGIVLG TGLALLRLSG VPGLTHAAKF YVELMRSLPL VLVIFWFYFL VPYLGAWAIG ADTPIQVGAF ASALVTFTLF EAAYFSEIVR AGIQSIPKGQ SAAARALGMS YAQVMRLVVL PQAFRNMVPL LLTQTIVLFQ DTSLVYVLSL TDFLGAASKV AQRDGRLVEM YLFAALVYFA VCFAASLLVR RLQARTAIAR
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