Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3924 |
Symbol | |
ID | 5834821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4362546 |
End bp | 4363655 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641369715 |
Product | agmatinase |
Protein accession | YP_001641366 |
Protein GI | 163853323 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0571349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAGTG CGGGTGAGAT CGCACCATCG CTGCACGTGG CTGTGGAGAC GCCGCGCCGG GGGAGGATCG TCATGGCGGA TGAGAGCGAA TCGGCGGGCG CGCGGGCGGA ACGGCTGGCG CGGTTCCAGC CGGCCTCGGG GATGGTGACG CCACGCTTCT CGGGGCTGGC GAGCTTCATG CGGCTGCCGG TGCTCGATCC CGCCGAGGCG GTGGGAGACA GGGCCGGCGA AGGGGCTGGC GAAGGGACTG GACTGGTCGA GATCGGTCTG ATCGGCATCC CCTTCGACGG CACCACCACC AACCGCCCCG GTGCCCGGCT CGGACCGCGG GCCGTGCGCG AAGCCTCCAC CGGCACGCGG GCGCTCAACC ACGCCACGGG GGTGGCGCCC TACGCCCTGG CCGCCTGCGC CGATCTCGGC GACGTGCCGG TCAACCCGGT GGACGCCGCC GAGACCGCCC GGCGGATCGA GGCGTTCTAC CGGCCGCTCG CCGAGGCCGG GATCGTGCCG CTCACGGTCG GCGGCGACCA TTTCATCACC TATCCGGTGC TGCGGGCGCT CGGGGCCGCC CGGCCGCTCG GGCTGATCCA TATCGACGCC CACAGCGACA CCGACGACAC TCAGTATGGC GGGGCGCGGC TCACCCACGG CACGCCGTTC CGGCGCGCGA TCGAGGACGG GGTGCTCGAT CCGCGGCGCT GCATCCAGAT CGGCATCCGC GGCAGCATGG ATGCGGCCGA CGAGCGCGAC TGGGCCCTGG CGCAGGGCAT GCGCATCCTC ACGATGGAGG AGGTCTGCGC CCGCGGCCTG CCGGAGGTGG CCGCGGAAGC CCGCGCCGTG ACCGGCGACG GCCCGACCTA TCTCAGCTTC GACATCGACG CCCTCGATCC CGCCTTCGCC CCCGGCACCG GCACGCCGGA GATCGGCGGC TTCACCACTC GCGAGGCGCT GCACCTGCTG CGGGCCCTGC GCGGCCTCGA TCTCGTCGGG GCGGATGTGG TGGAGGTCGC TCCTCCGCTC GATTCCGCCG GCATCACGGG TTTGGCGGGC GCCGGCATCG CCTTCGAGAT CCTGTGCCTG CTGGCCGAGC GGGTCGCCGC ACGGCGCTGA
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Protein sequence | MRSAGEIAPS LHVAVETPRR GRIVMADESE SAGARAERLA RFQPASGMVT PRFSGLASFM RLPVLDPAEA VGDRAGEGAG EGTGLVEIGL IGIPFDGTTT NRPGARLGPR AVREASTGTR ALNHATGVAP YALAACADLG DVPVNPVDAA ETARRIEAFY RPLAEAGIVP LTVGGDHFIT YPVLRALGAA RPLGLIHIDA HSDTDDTQYG GARLTHGTPF RRAIEDGVLD PRRCIQIGIR GSMDAADERD WALAQGMRIL TMEEVCARGL PEVAAEARAV TGDGPTYLSF DIDALDPAFA PGTGTPEIGG FTTREALHLL RALRGLDLVG ADVVEVAPPL DSAGITGLAG AGIAFEILCL LAERVAARR
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