| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3923 |
|---|
| Symbol | |
|---|
| ID | 5834820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 4361319 |
|---|
| End bp | 4362476 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641369714 |
|---|
| Product | metal dependent phophohydrolase |
|---|
| Protein accession | YP_001641365 |
|---|
| Protein GI | 163853322 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.714708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0260146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAC CTCGGGACCG ACACGAGCGT CAGGGAGTGC AACGCGAGGA CGTCGTCGTC
CTCGTCTCGG ACCGCCGCGA GCGGGCGGAG CGCCTTGCCC GCGGCATCGC CCTGGTTCTG
CCCTGCCGGG TCGTCGAGCC CGGTGCGGCC CTGCCCGCCG ACCGGCCGAT CGCCTTCGTC
GTCGATCTCG CCACCGATCT CGCGGCCGAT CGGGGAAGTG CCTGGATCAT GTGGCTCGCC
GAGCGCATTC GCGAGAGCGG GCTGCCCTGT CTCTATCTCG CCCGCGGCAA TGCCGTCCAA
GACACGGCGG CCGTGCGTCT GCTCGGCACG CCGACGGTGA TCGATCCGCG CCAGTCCGCC
GGCATCGTCC CGACGCTCAT CCGCCTCGTC GCGGAGGGAA AGGCGAGGGG AGGCTCATCC
GACAAGGCGC GGAAACCGGG CGGCGTAAGC CCCGAACTGC GGGTGGAGCG GGCCACCACC
CTCGTCACCC GCCTGTTCGA CAAGGCGGCC ACCGGCCGGC CCCCGAGCCC GGAGGAGGCC
GAGGAAGGCA CGCGGATCGT GCTCGACACG GTCTCCGAGG TCGGCATCCG CACCTGGCTC
GACCTCGTCT GGCGCCACGA CATCCAGGTC TACCAGCACT CCTTGAGCGT CGCGGGCTTC
GCCGCCGCCT TCGCCGCCGA ACTCGGCTTC TCCCGCGGCG ACCGGCAGCG GCTCGCCAAG
GCCGCGCTGC TGCACGATGT CGGCAAGGCG CTGATCCCCC ATGCCATCCT CAACAAGCCG
GGCCCCCTTA CGCCCGATGA GATGACCGTG ATGCGCACGC ATGCCGCGCT CGGCGCCGAC
CTGCTGGCCC AGGAGGGCGC CTTCGAGCCC GAGATCCTCG ACGTGGTGCG CTACCACCAC
GAGCGCCTCG ACGGGTCCGG CTATCCCGAG GGCCTGAAGG GCGCGCGGAT CAGCGATCTC
GTGCGGCTCG TGGCGATCTG CGACGTCCAC TCGGCCCTGA CCGAGCGCCG GGTCTACCGC
CCGCCGCTGC CCGCCGCCGA GGCCGCCGCG ATCATGCAGG CCCAGGCCGG CCAGCTCGAT
CCCGACCTGC TCAGGGTCTA CCGCCCGATC ATCTTCCGCG CCGGCGACGC CGCGGGCGGA
CCGTCCGTGC GGAGCTGA
|
|---|
| Protein sequence | MQEPRDRHER QGVQREDVVV LVSDRRERAE RLARGIALVL PCRVVEPGAA LPADRPIAFV
VDLATDLAAD RGSAWIMWLA ERIRESGLPC LYLARGNAVQ DTAAVRLLGT PTVIDPRQSA
GIVPTLIRLV AEGKARGGSS DKARKPGGVS PELRVERATT LVTRLFDKAA TGRPPSPEEA
EEGTRIVLDT VSEVGIRTWL DLVWRHDIQV YQHSLSVAGF AAAFAAELGF SRGDRQRLAK
AALLHDVGKA LIPHAILNKP GPLTPDEMTV MRTHAALGAD LLAQEGAFEP EILDVVRYHH
ERLDGSGYPE GLKGARISDL VRLVAICDVH SALTERRVYR PPLPAAEAAA IMQAQAGQLD
PDLLRVYRPI IFRAGDAAGG PSVRS
|
|---|
| |