| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3881 |
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| Symbol | rpoH2 |
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| ID | 5832292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4308481 |
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| End bp | 4309353 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641369671 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001641324 |
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| Protein GI | 163853281 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.382692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0609598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA TCGCGGGGAT GCGGCGTCAG TTCATTCGAA CAGCGATGGA GGCGCCGTTC
CTTGCGAGGG ATGAAGAGCG TGGTTTGGCG GTGGCCTGGA AGGAAGCGCG CGACGAGCGC
GCCCTGCACC GTCTGATCTC CGCGCATATG CGCCTCGTGA TCGCGCTTGC CGGCCGGTTT
CGCCATTACG GCCTGCCGAT GGCCGATCTC GTGCAAGAGG GCCATGTCGG CCTGATGGAG
GCCGCCGCCC GGTTTGAGCC GGAGCGCGAA GTCCGCTTCT CCACCTACGC CACGTGGTGG
ATCCGCGCCT CGATCCAGGA CTACATCCTG CGCAACTGGT CGATCGTGCG CGGCGGAACG
AGTTCCGCGC AGAAGGCCCT GTTCTTCAAC CTGCGCCGCC TGCGCGCCCG GCTGATGCAA
TCGACCGAGG AGCAGGTCGG CTCTGAGATC CACGGACGGA TCGCCACTGC GATCGGCGTC
TCACGTGAGG ACGTAGCGCT CATGGATGCC CGCCTGTCGG GCCCCGACAT GTCGCTGAAC
GCTCCGGTCG GTGAGGAGAG CGAGGCGTCC TCCGAGCGCA TGGACTTCCT GGTCGACAAC
GCCGCCCTGC CCGATGAAAC GGTCTCGGCC CTGGTCGATG GCGAACGGCG GCTCATCTGG
CTGCGGCAGG CCCTGACGGT GCTCTCCGAA CGCGAGCTCC GGATCCTGCG GGAACGGCGC
CTCGCCGAGG ATCAGGCGAC CCTGGAAGCG CTGGGCCACC GCCTCGGCAT CTCCAAAGAG
CGCGTCCGGC AGATCGAGAA CCGCGCCCTG GAGAAGCTGC GTCGGGCGCT CGCCGAGAAG
TTCCCGCAGG CACCGAGCAG CGTCTACGCC TGA
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| Protein sequence | MAEIAGMRRQ FIRTAMEAPF LARDEERGLA VAWKEARDER ALHRLISAHM RLVIALAGRF
RHYGLPMADL VQEGHVGLME AAARFEPERE VRFSTYATWW IRASIQDYIL RNWSIVRGGT
SSAQKALFFN LRRLRARLMQ STEEQVGSEI HGRIATAIGV SREDVALMDA RLSGPDMSLN
APVGEESEAS SERMDFLVDN AALPDETVSA LVDGERRLIW LRQALTVLSE RELRILRERR
LAEDQATLEA LGHRLGISKE RVRQIENRAL EKLRRALAEK FPQAPSSVYA
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