Gene Mext_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3714 
Symbol 
ID5831416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4112025 
End bp4112900 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content62% 
IMG OID641369505 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001641160 
Protein GI163853117 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.736415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATCG CAGTCTTAGG CGCATCCGGC ATGCTCGGAA GCGCCGCATT CCAATATTTA 
TCCGATCGTT TTCCCGGATC AGTTTATGCG ACGGCACGCT CGCCGGCAGT GAAGAACATC
TTTCCAGAAA GCGCTGCCAA CATCACCATC GGGATCGACG TCGAGAACGC GGACGCGCTG
GCCGGCTTCC TGCGAGAGGT GCGGCCCGAC GTAGTCGTGA ACTGCGTCGG TGTCGTCAAG
CAACTCTCCT CCGCTGAGGA CCCTCTAGTC GCGATCCCGA TTAACGCCAT CCTGCCGCAC
CGGCTCGCTC GGCTCGCTGA CCTAGTCGGC GCGCGCCTGA TACATATCAG CACGGATTGC
GTTTTCACCG GCCGCAAGGG CGATTACCGC GAGAGCGACG TGCCGGATGC GGAGGACCTC
TACGGCCGCT CGAAGCTGCT GGGCGAGGTC GATTACCCGA ACGCCGTGAC GCTACGCACC
TCCATTATTG GCCGCGAGTT CGGCAGCCGA AACGGCCTCG TCGAGTGGTT CCTCTCACAG
AGCGGATCGG TGCGTGGCTA CCGGCGGGCG ATCTTCTCAG GCCTCACGAC GGACGAACTG
GTGCGGGTGA TCGCCGACCG CGTTCTGCCG AACCCTGATC TGCGCGGCGT TTACCATGTG
AGCGTGGCCC CGATCAGTAA ATTCGATCTC CTCGGGATCG TCAGGGATGT CTATGGTGTC
GGGACCGAGA TCGAGCCCGA CGACGCGGTG GCGATCGACC GCTCCCTCAA TTCGGACCGG
TTCCGGGGGG CTACTGGCTA TGTGCCACCC TCCTGGCCGG ACCTGATCCG CAGCATGCGT
CGCTTCGACG AAGAATCCTT CTCACAGGTC CGCTGA
 
Protein sequence
MKIAVLGASG MLGSAAFQYL SDRFPGSVYA TARSPAVKNI FPESAANITI GIDVENADAL 
AGFLREVRPD VVVNCVGVVK QLSSAEDPLV AIPINAILPH RLARLADLVG ARLIHISTDC
VFTGRKGDYR ESDVPDAEDL YGRSKLLGEV DYPNAVTLRT SIIGREFGSR NGLVEWFLSQ
SGSVRGYRRA IFSGLTTDEL VRVIADRVLP NPDLRGVYHV SVAPISKFDL LGIVRDVYGV
GTEIEPDDAV AIDRSLNSDR FRGATGYVPP SWPDLIRSMR RFDEESFSQV R